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scnpilot_solids2_trim150_scaffold_2338_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2338_curated_1
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13..759)
DNA (747bp) protein (249aa)
Putative ABC transporter permease protein HI_0355 n=1 Tax=Rhizobium sp. RepID=L0NKS6_RHISP
ABC transporter permease {ECO:0000313|EMBL:KJS09057.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
putative ABC transporter, permease protein
scnpilot_solids2_trim150_scaffold_2338_curated_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1069..2037
DNA (969bp) protein (323aa)
Mg2+/Co2+ transporter n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YFT8_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig121, whole genome shotgun sequence {ECO:0000313|EMBL:KIU54118.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Mg2 transporter protein CorA family protein; K03284 magnesium transporter
scnpilot_solids2_trim150_scaffold_2338_curated_3
unknown

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comp(2048..2188)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2338_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2331..2999
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64644.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_2338_curated_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3110..3625)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ59_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31241.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Thiol:disulfide interchange protein-like protein
scnpilot_solids2_trim150_scaffold_2338_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3721..4383
DNA (663bp) protein (221aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X406_OCHA4
Transcriptional regulator {ECO:0000313|EMBL:KDP70427.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
two component transcriptional regulator
scnpilot_solids2_trim150_scaffold_2338_curated_7
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4383..5735
DNA (1353bp) protein (451aa)
integral membrane sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X405_OCHA4
Histidine kinase {ECO:0000313|EMBL:KGE81668.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
scnpilot_solids2_trim150_scaffold_2338_curated_8
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5785..6513)
DNA (729bp) protein (243aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X404_OCHA4
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KGE81669.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_solids2_trim150_scaffold_2338_curated_9
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6729..6938)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TD62_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04400.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2338_curated_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6986..7432)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BEU9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58645.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_2338_curated_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7448..7612)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVC2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63728.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
scnpilot_solids2_trim150_scaffold_2338_curated_12
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7627..8616)
DNA (990bp) protein (330aa)
Cbb3-type cytochrome oxidase, cytochrome c subunit n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDS4_9RHIZ
Cbb3-type cytochrome oxidase, cytochrome c subunit
Cbb3-type cytochrome oxidase, cytochrome c subunit {ECO:0000313|EMBL:AGK58646.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_2338_curated_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8613..10097)
DNA (1485bp) protein (495aa)
Cbb3-type cytochrome oxidase subunit 1 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8Q1_9RHIZ
Cbb3-type cytochrome oxidase subunit 1
Cbb3-type cytochrome oxidase subunit 1 {ECO:0000313|EMBL:AGK58647.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying 13 items

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