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scnpilot_solids2_trim150_scaffold_1726_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1726_curated_1
bacterium YEK0313, Bacteria

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comp(3..1001)
DNA (999bp) protein (333aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ02_9RHIZ
scnpilot_solids2_trim150_scaffold_1726_curated_2
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1342..1980)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036EB1B7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA19213.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_1726_curated_3
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2072..2647)
DNA (576bp) protein (192aa)
Invasion associated locus B family protein n=2 Tax=Methylobacterium RepID=B1LTU9_METRJ
invasion associated locus B family protein
Invasion associated locus B family protein {ECO:0000313|EMBL:ACB25468.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
scnpilot_solids2_trim150_scaffold_1726_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2925..3812
DNA (888bp) protein (296aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cytochrome C oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
cytochrome B561 n=1 Tax=Xanthobacteraceae RepID=UPI00037E71D9
scnpilot_solids2_trim150_scaffold_1726_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3845..5461
DNA (1617bp) protein (539aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome C oxidase subunit I n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000366AB65
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:KFC75269.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_1726_curated_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5614..6558
DNA (945bp) protein (315aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8B4_9RHIZ
scnpilot_solids2_trim150_scaffold_1726_curated_7
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6558..6722
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EPK4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50209.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_solids2_trim150_scaffold_1726_curated_8
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6724..7329
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000372293C
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
cytochrome C oxidase assembly protein CtaG/Cox11; K02258 cytochrome c oxidase assembly protein subunit 11
scnpilot_solids2_trim150_scaffold_1726_curated_9
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7342..8211
DNA (870bp) protein (290aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZKN5_METPB
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:ACB81605.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids2_trim150_scaffold_1726_curated_10
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8297..8671
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036ACD48
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB94374.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
scnpilot_solids2_trim150_scaffold_1726_curated_11
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8675..9427
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037238E5
surfeit locus 1 family protein
Surfeit locus 1 family protein {ECO:0000313|EMBL:ACK50219.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_solids2_trim150_scaffold_1726_curated_12
bacterium YEK0313, Bacteria

Not on your lists

9459..10871
DNA (1413bp) protein (471aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
threonine synthase n=1 Tax=Pannonibacter phragmitetus RepID=UPI000376284E
Threonine synthase {ECO:0000313|EMBL:CEJ10322.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_1726_curated_13
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10927..11604
DNA (678bp) protein (226aa)
N-acetyltransferase GCN5; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
GCN5 family N-acetyltransferase n=2 Tax=Labrenzia RepID=U7FW49_9RHOB
GCN5 family N-acetyltransferase {ECO:0000313|EMBL:ERP88611.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
scnpilot_solids2_trim150_scaffold_1726_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11692..13479
DNA (1788bp) protein (596aa)
diguanylate cyclase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003150205
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain protein {ECO:0000313|EMBL:KFC75278.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
diguanylate cyclase/phosphodiesterase
Displaying 14 items

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