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scnpilot_solids2_trim150_scaffold_3213_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3213_curated_1
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1188
DNA (1188bp) protein (396aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037B7773
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
chromosome segregation protein SMC; K03529 chromosome segregation protein
scnpilot_solids2_trim150_scaffold_3213_curated_2
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1622..1825
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMM6_METSB
hypothetical protein; K02116 ATP synthase protein I
Uncharacterized protein {ECO:0000313|EMBL:ACK52705.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_solids2_trim150_scaffold_3213_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1865..2629
DNA (765bp) protein (255aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMM5_METSB
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_3213_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2696..2923
DNA (228bp) protein (76aa)
H+transporting two-sector ATPase C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
H+transporting two-sector ATPase C subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGS9_XANP2
H+transporting two-sector ATPase C subunit {ECO:0000313|EMBL:KFC75257.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_3213_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2956..3504
DNA (549bp) protein (183aa)
FoF1 ATP synthase B' chain; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
PREDICTED: ATP synthase subunit b'''', chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B0D8
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_3213_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3536..4015
DNA (480bp) protein (160aa)
H+-transporting two-sector ATPase subunit B/B'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030DD4B4
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_3213_curated_7
unknown

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comp(4168..4590)
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3213_curated_8
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4747..5205
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L5Z8_9GAMM
putative carboxymuconolactone decarboxylase
scnpilot_solids2_trim150_scaffold_3213_curated_9
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5205..6080
DNA (876bp) protein (292aa)
Sigma-70 region 2 n=1 Tax=Burkholderia multivorans CF2 RepID=J4SMI5_9BURK
RNA polymerase sigma factor SigJ; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Sigma-70 region 2 {ECO:0000313|EMBL:EJO62197.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CF2.;"
scnpilot_solids2_trim150_scaffold_3213_curated_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6229..7293)
DNA (1065bp) protein (355aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2]
glycine dehydrogenase subunit 2 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ECF1DA
Displaying 10 items

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