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scnpilot_solids2_trim150_scaffold_818_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_818_curated_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..573
DNA (573bp) protein (191aa)
MaoC family dehydratase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003191986
Dehydratase {ECO:0000313|EMBL:KFG70287.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
dehydratase
scnpilot_solids2_trim150_scaffold_818_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

578..1453
DNA (876bp) protein (292aa)
citrate (pro-3S)-lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003739FB7
Uncharacterized protein {ECO:0000313|EMBL:KFC67558.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_818_curated_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1605..2210)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0E660
Flavin reductase {ECO:0000313|EMBL:KFG70440.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_818_curated_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2296..4806
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U855_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA20559.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_818_curated_5
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4838..5773
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CLC2_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24751.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
scnpilot_solids2_trim150_scaffold_818_curated_6
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5850..6086
DNA (237bp) protein (79aa)
UPI0003CF51EE related cluster n=1 Tax=unknown RepID=UPI0003CF51EE
AsnC family transcriptional regulator {ECO:0000313|EMBL:ESY35373.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
transcriptional regulator AsnC-type-like protein
scnpilot_solids2_trim150_scaffold_818_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6194..7543)
DNA (1350bp) protein (450aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH79_NITHX
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE64418.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_818_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7761..9755)
DNA (1995bp) protein (665aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
thrS; threonine-tRNA ligase ThrS (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Y2_9RHIZ
scnpilot_solids2_trim150_scaffold_818_curated_9
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10024..11424
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003668BF4
multidrug efflux protein
Putative multidrug efflux protein {ECO:0000313|EMBL:BAF89369.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_818_curated_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11428..11760)
DNA (333bp) protein (111aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2Y1_9RHIZ
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein; K08998 hypothetical protein
scnpilot_solids2_trim150_scaffold_818_curated_11
bacterium YEK0313, Bacteria

Not on your lists

comp(11805..12251)
DNA (447bp) protein (149aa)
nitrogen-fixing protein NifU n=1 Tax=Methylobacterium sp. 88A RepID=UPI000368510A
Uncharacterized protein {ECO:0000313|EMBL:CEJ12669.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
nitrogen-fixing NifU domain-containing protein
scnpilot_solids2_trim150_scaffold_818_curated_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12606..13247
DNA (642bp) protein (214aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2X8_9RHIZ
scnpilot_solids2_trim150_scaffold_818_curated_13
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13278..13697
DNA (420bp) protein (140aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
phosphoribosyl-AMP cyclohydrolase (PRA-CH) (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Oligotropha carboxidovorans RepID=B6JEN4_OLICO
scnpilot_solids2_trim150_scaffold_818_curated_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13844..14794
DNA (951bp) protein (317aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2X5_9RHIZ
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EIM30567.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
patatin; K07001 NTE family protein
scnpilot_solids2_trim150_scaffold_818_curated_15
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14949..15377)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E11F8E
Signal-transduction protein {ECO:0000313|EMBL:EIZ82269.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
signal-transduction protein
scnpilot_solids2_trim150_scaffold_818_curated_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15512..16336)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003195607
Rhomboid family protein {ECO:0000313|EMBL:KFC67575.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rhomboid-like protein
scnpilot_solids2_trim150_scaffold_818_curated_17
unknown

Not on your lists

16465..16707
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_818_curated_18
unknown

Not on your lists

16704..17291
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_818_curated_19
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17386..17994
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SSA5_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD97082.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
scnpilot_solids2_trim150_scaffold_818_curated_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18066..18416
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJJ7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63600.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_818_curated_21
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18521..18742
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QSF2_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AGW91007.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
scnpilot_solids2_trim150_scaffold_818_curated_22
unknown

Not on your lists

18755..18859
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_818_curated_23
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18976..19992
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TD88_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04426.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
transglutaminase
scnpilot_solids2_trim150_scaffold_818_curated_24
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20288..20923
DNA (636bp) protein (212aa)
Transglutaminase-like cysteine peptidase, BTLCP n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQL7_NITWN
transglutaminase-like cysteine peptidase, BTLCP
Transglutaminase-like cysteine peptidase, BTLCP {ECO:0000313|EMBL:ABA05424.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
scnpilot_solids2_trim150_scaffold_818_curated_25
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21029..21559)
DNA (531bp) protein (177aa)
acetyltransferase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000381B645
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase {ECO:0000313|EMBL:EJL58184.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_818_curated_26
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21587..21910)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFM4_METNO
Methylobacterium aquaticum plasmid pMaq22A_1p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ48870.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_818_curated_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22041..22709
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037FDB3A
Uncharacterized protein {ECO:0000313|EMBL:KFC67581.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_818_curated_28
bacterium YEK0313, Bacteria

Not on your lists

22706..23401
DNA (696bp) protein (232aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZY56_9PROT
aluminum resistance protein
scnpilot_solids2_trim150_scaffold_818_curated_29
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23506..24768
DNA (1263bp) protein (421aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9H1_9BRAD
scnpilot_solids2_trim150_scaffold_818_curated_30
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25119..26414)
DNA (1296bp) protein (432aa)
saccharopine dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E36E6C
Saccharopine dehydrogenase {ECO:0000313|EMBL:EZQ15491.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
carboxynorspermide hydratase
Displaying items 1-30 of 34 in total

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