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scnpilot_solids2_trim150_scaffold_1447_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1447_curated_1
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..873
DNA (873bp) protein (291aa)
NLP/P60 protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IJA7_METNO
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACL56122.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_1447_curated_2
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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904..1635
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035E580C
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ47137.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
putative 3-oxoacyl-(acyl-carrier-protein) reductase 1
scnpilot_solids2_trim150_scaffold_1447_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1716..3923)
DNA (2208bp) protein (736aa)
Enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase {ECO:0000313|EMBL:KFC75334.1}; EC=1.1.1.35 {ECO:0000313|EMBL:KFC75334.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CCAD7
scnpilot_solids2_trim150_scaffold_1447_curated_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4085..5293)
DNA (1209bp) protein (403aa)
3-ketoacyl-CoA thiolase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXN1_9RHIZ
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIM28723.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_1447_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5334..7124)
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXN2_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIM28724.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acyl-CoA dehydrogenase domain-containing protein
scnpilot_solids2_trim150_scaffold_1447_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7358..8368
DNA (1011bp) protein (337aa)
pyridoxal-5'-phosphate-dependent enzyme, beta subunit; K01754 threonine dehydratase [EC:4.3.1.19]
L-threonine ammonia-lyase {ECO:0000313|EMBL:ABD06332.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ABD06332.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
L-threonine ammonia-lyase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZM8_RHOP2
scnpilot_solids2_trim150_scaffold_1447_curated_7
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8377..8895)
DNA (519bp) protein (173aa)
Transcriptional regulator, MerR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIP3_BEII9
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACB94736.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
scnpilot_solids2_trim150_scaffold_1447_curated_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9195..12710
DNA (3516bp) protein (1172aa)
Sel1-like repeat protein {ECO:0000313|EMBL:KFC75338.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KFC75338.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Sel1 domain protein repeat-containing protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILD5_METNO
Sel1 domain-containing protein repeat-containing protein; K13582 localization factor PodJL
scnpilot_solids2_trim150_scaffold_1447_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12857..13531)
DNA (675bp) protein (225aa)
Metallophosphoesterase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZZ6_STAND
metallophosphoesterase; K06953
Metallophosphoesterase {ECO:0000313|EMBL:ADH87410.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_1447_curated_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13554..15731)
DNA (2178bp) protein (726aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/H associated domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZZ5_STAND
DEAD/H associated domain protein {ECO:0000313|EMBL:ADH87409.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Displaying 10 items

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