ggKbase home page

scnpilot_solids2_trim150_scaffold_3511_curated

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3511_curated_1
unknown

Not on your lists

comp(1..249)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3511_curated_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269..1180)
DNA (912bp) protein (304aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1K5_STAND
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ADH91430.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_3511_curated_3
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1269..3902)
DNA (2634bp) protein (878aa)
UPI0003CFFCE9 related cluster n=1 Tax=unknown RepID=UPI0003CFFCE9
DNA-binding protein {ECO:0000313|EMBL:ESY94309.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
putative DNA double-strand break repair
scnpilot_solids2_trim150_scaffold_3511_curated_4
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3899..5023)
DNA (1125bp) protein (375aa)
UPI0003D04C89 related cluster n=1 Tax=unknown RepID=UPI0003D04C89
Exonuclease {ECO:0000313|EMBL:ESY94310.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
putative exonuclease
scnpilot_solids2_trim150_scaffold_3511_curated_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5201..7435)
DNA (2235bp) protein (745aa)
twin-arginine translocation pathway signal (EC:1.2.99.3)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8C3_9BRAD
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EFI50808.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Displaying 5 items

View Taxonomy