ggKbase home page

scnpilot_solids2_trim150_scaffold_651_curated_23

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 21098..23128

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 658.0
  • Bit_score: 539
  • Evalue 2.10e-150
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003740D89 similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 680.0
  • Bit_score: 542
  • Evalue 4.60e-151
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACK49819.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 658.0
  • Bit_score: 539
  • Evalue 9.40e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2031
ATGCGGCTACGGCTTGTGCTCGCCTGCAGCGTTCTCGCGTTGGCCTCGGCCGGAGCGCTGGCCGAGAGCGTTGGCGTGGCCACCACCGGCTCGCTGGCCCCGGCAGCGGCGGCTCCATCCGGCGACAAGGCGGCTGCGCGCGCTGCCATGGTTCGCGATGCCCTGTTTGCCTATGACAAGGGCGACCTCGCGGCCGGTGACGCCTCGGCGGCGCAGATTGACGACGCTTCGGCCCGCCTCGCGCTGGAATGGGCGGCCTTGCGTGAAAACGGGCGGAAGGCCGGTTTCCAGCGCATCAACGCGTTTCTCGCGGCGCATCCTGGTTTCCCGATGACACGCTGGCTGCGCAACCGTGCCGAGGAAGCGCTGTTCACGGAGCGCCGCGACACCGCGACCGTACGGGCGTTCTTTAAGGGCGACGCGCCCGAAACGGCCGCCGGCAAGGTCAGCCTGGCATTGGCAGAGCGCGCCCAGGGCGACAAGGCGGCCGCCATCCGGCTGGTCCGTTCGGCCTGGCGCGACAATCGCCTGCCGCAGGATATCGCCCGTTTCATCACAACCGAATTTCCTCAGGCCGTCGCCGTCCCGGACAGCTTGTATCGCGCGTTGCGGCAGCTCTATGCCGGCAATGAGGCCGAGGGGTTGCGTTTCGCCGAGATGGCGGGGCCGGACGAACTCGCGCTCGGCAAGGCGCTCGCCGCCTCAATCGATGCGCGAAAGAATGCCGCGACGCTGCTCGAAGCCGTGCCGGCCCGGCTGCGCAAGAATCCAGCCTATCTGTTCGCGCAGGCGCAATTGCTGCGACGGCAGGACAAACTCGCCGAGGCCGCTGCCGTGCTGCAGCAGGCGCCCACCGATGTCGACGCGTTGATCGCACCCGAAAGCTGGTGGGACGAGCGCCGCCTGCTCGCCCGCAAGCTGCTTGACGCCAAACAACCGGCGCTGGCCTATGCGGTGGTCGATCGGGCGACGCCCGCAAGCGATGCCGACCGCGTGGAGGCCGCCTTCCATGCCGGCTGGATCGCGCTGCGCTATCTTGGGCAGCCGGCCGTGGCGCGCCGGCATTTCGAGATCGCGGACGACGCCGCGCACACGCCGGTGTCGCTGGCCCGCGCCAATTACTGGCTTGGCCGCGCCGCCGAGGCCGGAGGCGGCGGCAGCACGATCGCGGCTTATGAGGATGCCGCCCGCTATTCCACGACCTATTACGGCCAGCTTGCCATGCGCAAACTTGGCCGCGAGCGCCTGTCGCTGCCGGCCGTGCCGAACGATGCCAGTGCCCGCCACGCCTTCTCGAGCACCGAGATCGCCGGCGCGATCCGAACGCTGTTCGAGGCCGGCTCAGCCTCGCTTGCGGCGCCGCTCGTGATCGACCTTGCCCGCACGCTGCCGGACGCGAGTGCGCTCGATGCGCTCGGCGACCTGCTGCAGGACCGCCACCAGCCGCGCCTGTCGGTAGTCGTCGGCAAGCTGGCGCTGCAACGCGGCTTCGTCCTGACCCAGCACGCCTACCCGATCCAGGGCGTGCCGGATTTCGAGCCGCTCGACGGTTCGGCCGGCCGGCCGATGGTTTATGCGGTGGCGCGCCAGGAGAGCGAATTCAACGCGGAAGCCGTATCCCATGCCGGCGCGCGCGGGCTGATGCAGATGATGCCGGCCACGGCCAAGCGCACGGCGCAGGCGTTCCATGTCGATTACGACGCCAAGCGCCTCACCAGCGATCCGGCCTACAATGCCCGGCTCGGCGCGGCGCATCTCGGCCAGCTGCTGCGCGAGCAGAGCGGCTCCCATATCCTGACCTTCGCCGCCTATAATGCCGGTGGACGCCGCGTGAAGGAGTGGATCGCGGCGCATGGCGATCCGCGTCGTGCTGGTGTCGATCCGATCGACTGGGTCGAGCGCATTCCGTTCAGCGAGACGCGCAACTACGTGCAACGCGTGATGGAAAACCTCGAGGTCTATCGCGCGCGGCTCGGCGAACAGCAGGCGCGGCTGCAGCAGACCGACGATACCACCGCCACGGCGAAATAG
PROTEIN sequence
Length: 677
MRLRLVLACSVLALASAGALAESVGVATTGSLAPAAAAPSGDKAAARAAMVRDALFAYDKGDLAAGDASAAQIDDASARLALEWAALRENGRKAGFQRINAFLAAHPGFPMTRWLRNRAEEALFTERRDTATVRAFFKGDAPETAAGKVSLALAERAQGDKAAAIRLVRSAWRDNRLPQDIARFITTEFPQAVAVPDSLYRALRQLYAGNEAEGLRFAEMAGPDELALGKALAASIDARKNAATLLEAVPARLRKNPAYLFAQAQLLRRQDKLAEAAAVLQQAPTDVDALIAPESWWDERRLLARKLLDAKQPALAYAVVDRATPASDADRVEAAFHAGWIALRYLGQPAVARRHFEIADDAAHTPVSLARANYWLGRAAEAGGGGSTIAAYEDAARYSTTYYGQLAMRKLGRERLSLPAVPNDASARHAFSSTEIAGAIRTLFEAGSASLAAPLVIDLARTLPDASALDALGDLLQDRHQPRLSVVVGKLALQRGFVLTQHAYPIQGVPDFEPLDGSAGRPMVYAVARQESEFNAEAVSHAGARGLMQMMPATAKRTAQAFHVDYDAKRLTSDPAYNARLGAAHLGQLLREQSGSHILTFAAYNAGGRRVKEWIAAHGDPRRAGVDPIDWVERIPFSETRNYVQRVMENLEVYRARLGEQQARLQQTDDTTATAK*