name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_651_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..1005
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031CAB2C
Branched-chain amino acid ABC-type transport system permease component {ECO:0000313|EMBL:KFC65220.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
|
|
scnpilot_solids2_trim150_scaffold_651_curated_2
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
1067..1546
|
UPI0003CF9022 related cluster n=1 Tax=unknown RepID=UPI0003CF9022
Membrane protein {ECO:0000313|EMBL:KIF43008.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
putative transmembrane protein
|
|
scnpilot_solids2_trim150_scaffold_651_curated_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1821..2552
|
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8]
arginyl-tRNA-protein transferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3EB90
|
|
scnpilot_solids2_trim150_scaffold_651_curated_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2519..3754)
|
Major facilitator superfamily protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KI67_9PROT
transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
scnpilot_solids2_trim150_scaffold_651_curated_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3959..4696
|
pcaH; protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
Protocatechuate 3,4-dioxygenase beta chain n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J580_POLGS
Protocatechuate 3,4-dioxygenase beta chain {ECO:0000313|EMBL:ADZ71139.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
|
|
scnpilot_solids2_trim150_scaffold_651_curated_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4700..5329
|
pcaG; Protocatechuate 3,4-dioxygenase, alpha subunit; K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
protocatechuate 3,4-dioxygenase subunit alpha n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F77807
Protocatechuate 3,4-dioxygenase, alpha subunit {ECO:0000313|EMBL:ADZ71140.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
|
|
scnpilot_solids2_trim150_scaffold_651_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5549..7792)
|
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA topoisomerase IV subunit A n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3AA35
|
|
scnpilot_solids2_trim150_scaffold_651_curated_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8109..8843)
|
DNA repair protein RecO n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z078_9RHIZ
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
|
|
scnpilot_solids2_trim150_scaffold_651_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9009..9938)
|
GTPase Era n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000382C79E
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GTP-binding protein Era; K03595 GTP-binding protein Era
|
|
scnpilot_solids2_trim150_scaffold_651_curated_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9931..10641)
|
ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003788FFD
|
|
scnpilot_solids2_trim150_scaffold_651_curated_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10638..11435)
|
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000302887F
|
|
scnpilot_solids2_trim150_scaffold_651_curated_12
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11795..12199)
|
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
4''''-phosphopantetheinyl transferase n=1 Tax=Aureimonas ureilytica RepID=UPI0003734263
holo-(acyl-carrier-protein) synthase
|
|
scnpilot_solids2_trim150_scaffold_651_curated_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12204..12956)
|
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pdxJ; pyridoxine 5\'-phosphate synthase (PNP synthase) (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3Y8_METSZ
|
|
scnpilot_solids2_trim150_scaffold_651_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12953..13537)
|
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAD4_STAND
|
|
scnpilot_solids2_trim150_scaffold_651_curated_15
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13580..15775)
|
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACB96054.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ACB96054.1};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036E07B2
|
|
scnpilot_solids2_trim150_scaffold_651_curated_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15900..16301)
|
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lo
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWH0_9RHIZ
|
|
scnpilot_solids2_trim150_scaffold_651_curated_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16589..17221
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136W5_RHOPS
LabA-like protein {ECO:0000313|EMBL:KIZ41494.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_651_curated_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17422..18093
|
Uracil-DNA glycosylase, family 4 n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGZ4_9BRAD
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EKS38795.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative uracil-DNA glycosylase
|
|
scnpilot_solids2_trim150_scaffold_651_curated_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18388..18966)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PB81_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38796.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
thiol-specific antioxidant-like protein
|
|
scnpilot_solids2_trim150_scaffold_651_curated_20
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18998..19471)
|
single-stranded DNA-binding protein n=1 Tax=Methylocystis parvus RepID=UPI00031E65C1
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
|
|
scnpilot_solids2_trim150_scaffold_651_curated_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19491..20399)
|
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJG3_RHOPT
|
|
scnpilot_solids2_trim150_scaffold_651_curated_22
unknown
|
Not on your lists |
20655..20885
|
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_651_curated_23
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21098..23128
|
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003740D89
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACK49819.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
scnpilot_solids2_trim150_scaffold_651_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23220..24125
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035C1FDE
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:KFC69573.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alpha/beta hydrolase fold protein
|
|
scnpilot_solids2_trim150_scaffold_651_curated_25
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24128..24766)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2CWR9_9RHIZ
NADH-ubiquinone oxidoreductase subunit E {ECO:0000313|EMBL:KEA07871.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
nuoE1; NADH-ubiquinone oxidoreductase chain E protein
|
|
scnpilot_solids2_trim150_scaffold_651_curated_26
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24776..26629)
|
Putative outer membrane protein and related peptidoglycan-associated (Lipo)proteins n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EG85_BRASB
Uncharacterized protein {ECO:0000313|EMBL:KJS09633.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
outer membrane protein and related peptidoglycan-associated (lipo)proteins
|
|
scnpilot_solids2_trim150_scaffold_651_curated_27
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26873..28330)
|
Porin n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UB93_METS4
porin
Porin {ECO:0000313|EMBL:ACA15474.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
|
|
scnpilot_solids2_trim150_scaffold_651_curated_28
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28784..29617)
|
CDP-diacylglycerol/serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol/serine O-phosphatidyltransferase {ECO:0000313|EMBL:ACL56488.1}; EC=2.7.8.8 {ECO:0000313|EMBL:ACL56488.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F39580
|
|
scnpilot_solids2_trim150_scaffold_651_curated_29
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(29627..29761)
|
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
psd; phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2N5_9PROT
|