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scnpilot_solids2_trim150_scaffold_855_curated_3

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(3305..4450)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 377.0
  • Bit_score: 513
  • Evalue 3.10e-142
ribonuclease D (EC:3.1.13.5) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 379.0
  • Bit_score: 509
  • Evalue 1.00e-141
ribonuclease D n=1 Tax=Methylocystis parvus RepID=UPI00035C743D similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 378.0
  • Bit_score: 518
  • Evalue 5.30e-144

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGGACCTGATTGCTTCGACCTCCGATCTCGCCGCCGTTTGCCAACGCCTCGCCAGCCATGCCTTCGTGACCGTCGATACCGAATTCCTGCGCGAGACGACCTTCTGGCCGAAGCTCTGCGTCGTGCAACTGGCGAGCGAGGCGGAAGCGGTCGCCGTCGATGCGCTGGCGCCCGACATCGACCTCGCGCCGTTCTTCGACCTGATGCGCGATCCCAAGGTGGTCAAGGTGTTCCACGCCGCCCGGCAGGACCTCGAGATCATCTGGCACCTCGGCGGTTTCGTCGCGGCGCCGCTGTTCGATACGCAGGTCGCGGCGATGGTGTGCGGCTTCGGCGATCAGGTCTCCTACGAGCAACTCGCCGGCAGTCTCGCCGGCGCCCATATCGACAAGTCGTCGCGCTTTACCGACTGGTCGCGCCGCCCGCTGTCGCCGGCGCAACTCGAATACGCCATCGCCGACGTAACGCATCTGCGCACCGTCTACGTCAAGCTGCTCGCCAAGCTCGAAAAGAACGGCCGGCTCGACTGGCTCGGCGAGGAAATGTCGATCCTGACCTCGCCCGATACCTATCGCCAGCCGCCGGAACGCGCCTGGGAACGGCTCAAGACGCGCATCCGCAAACCGCGCGACCTCGCCGTGCTGATCGAGGTCGCCGCCTGGCGCGAACGCGAGGCGCAGAGCCGCGACGTGCCGCGCTCCCGGGTGCTCAAGGACGAGGCCGTCGGCGAGGTCGCGCTCGCCGCGCCGCGAACGGTGGAGGAACTCGGCCGGCTGCGCACCATCCCGCAAGGCTTCGAGCGTTCAAGGGTCGGGGCCGATATCCTCGCCGCCGTCGAGGCCGGCCTGGCGCGCGATCCCGCCGGCCTGCCGGCGATGCACAAGGAGCGCTCCAATTCCAGCGCCGGCGCCACCGTGCAACTGCTCAAGGTGCTGTTGCAGGCCACATCCGAGCACAAGGGCGTCGCCGCCAAGATCATCGCCTCCGTCGACGATCTCGAAGCGATCGCCACCGATCACGCCGACGATCGCGCCGTGCTGCGCGGCTGGCGGCGCGAATTGTTCGGTGAGCAGGCCATCGCCCTCAAGGAAGGCCGCCTGACGCTCGGCGTCGAGAAAGGCCGCGTGGTGACAAGGATGGCGTGA
PROTEIN sequence
Length: 382
MDLIASTSDLAAVCQRLASHAFVTVDTEFLRETTFWPKLCVVQLASEAEAVAVDALAPDIDLAPFFDLMRDPKVVKVFHAARQDLEIIWHLGGFVAAPLFDTQVAAMVCGFGDQVSYEQLAGSLAGAHIDKSSRFTDWSRRPLSPAQLEYAIADVTHLRTVYVKLLAKLEKNGRLDWLGEEMSILTSPDTYRQPPERAWERLKTRIRKPRDLAVLIEVAAWREREAQSRDVPRSRVLKDEAVGEVALAAPRTVEELGRLRTIPQGFERSRVGADILAAVEAGLARDPAGLPAMHKERSNSSAGATVQLLKVLLQATSEHKGVAAKIIASVDDLEAIATDHADDRAVLRGWRRELFGEQAIALKEGRLTLGVEKGRVVTRMA*