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scnpilot_solids2_trim150_scaffold_1605_curated_4

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(2551..3459)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI000370540E similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 281.0
  • Bit_score: 373
  • Evalue 1.70e-100
LysR family transcriptional regulator HdfR {ECO:0000313|EMBL:BAQ16592.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 279.0
  • Bit_score: 422
  • Evalue 4.40e-115
HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 281.0
  • Bit_score: 364
  • Evalue 3.20e-98

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Taxonomy

Methyloceanibacter caenitepidi → Methyloceanibacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGATGGATATCGAGCTGGCCCGGACCTTTCTGGAAATCGTCGCGACGCGCAGCTTCGTGCGCGCGGCGGAGCGCCTGAATGTCAGCCAGACGGCGGTGAGCGCCCGCGTGCGCTCGCTCGAGCAGCAGCTTGGCCGCAAGCTGTTCGTGCGCAACAAGAACGGCGCCGCGCTGACCCCGGCCGGCGAGCAGTTCCTGCGCTATGCGCCGACCTTCGTGCAATTATGGGAGAGCGCGCGCCATCAGGTCGCGGCACCGCCTGGGCGGCGCGCCGTGCTGAGCATTGGCGGCGAACTGAACCTGTGGCATCCCTGGCTGCTCGAATGGCTGCAATGGATGCGCCGGCGCGCGCCCGATATCGCGCTCAGGGCGCAGGTCGGCGCGCCGGAGGACCTGGCCGATCAGGTCGCCAATGGCGTGCTCGACATCGCCGTGATGTATGCGCCGCAATACCGGCCGGGGTCGCGGGTCGAATTGCTGCTCGAGGAGAAACTCGTCCTCGTCAGCACCGATCCGGACGCGCGGCGCATCGATCCGGAAACCTATGTCTATATCGATTGGGGGCCGGATTTCGCGCATCGGCACGACATCAGCTTTCCCGAGATCACCAATCCGGGCCTGTTTGTCGGCCTCGGGCCGCTCGGCCTGAGCTACATTCTCGGCGCGGGCGGCGCCGGCTATTTCCGCCAGCGCGCGGTGGCGCCGCATCTGGCCGGCGGACGGCTGCATCTTGTCGCGGGTGCGCCAAGCTTCTTCTATCCGATCTATGCTGTGTGTTCGGCGCAGTCGGATGACGACCTGCTGGCCGTCGCCATCGAAGGGCTGCGCAGCGTCGCCGACAGCGATCCGGCCCTGAAACGTGAGCGCGGCGAGCCCGGTTTTCCATCTGATCAGGAGGTTCGATCATGA
PROTEIN sequence
Length: 303
MMDIELARTFLEIVATRSFVRAAERLNVSQTAVSARVRSLEQQLGRKLFVRNKNGAALTPAGEQFLRYAPTFVQLWESARHQVAAPPGRRAVLSIGGELNLWHPWLLEWLQWMRRRAPDIALRAQVGAPEDLADQVANGVLDIAVMYAPQYRPGSRVELLLEEKLVLVSTDPDARRIDPETYVYIDWGPDFAHRHDISFPEITNPGLFVGLGPLGLSYILGAGGAGYFRQRAVAPHLAGGRLHLVAGAPSFFYPIYAVCSAQSDDDLLAVAIEGLRSVADSDPALKRERGEPGFPSDQEVRS*