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scnpilot_solids2_trim150_scaffold_639_curated_7

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 6496..7167

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter permease n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H1M0_PSESX similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 215.0
  • Bit_score: 227
  • Evalue 1.40e-56
Amino acid ABC transporter permease {ECO:0000313|EMBL:AHL34981.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 217.0
  • Bit_score: 232
  • Evalue 4.80e-58
polar amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 202.0
  • Bit_score: 190
  • Evalue 8.00e-46

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Taxonomy

Pseudomonas brassicacearum → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGACGGATTGGGCGCGCACCTACGAGAATCTGCCGTATTTTCTCGATGCGCTCCTGACCGGCGCGGTGATGACGGCGATCGTCACCGCCGGCGGCTTCATCGTCTCGGTGCTGCTCGGGCTGGTGCTTGCCGGCTGCAAGACCTCGCGCTCGCGGCTCCTGAGGACGTTCGCCTATATCTATGTCGAAATCTTCAGGGCCGTGCCGGTGCTGACGCAGCTCTTCGTGATCTATTTCGGGCTCGGTTCGATCGGCATCAAGCTTGACCCGATCCCGGCCGCGATCATCGGCTTCGGCCTGAATGGCGGCGCCTACCTGACCGAGGTGTTCCGGGCCGGTATCGCGGCGATCGATCGCGGGCAGAGCGAGGCGGCGATCGCCATCGGCATGACGCGCGGCATGGCCTTGCGCACGATCATCCTGCCGCAGACGGTGAGGGTCGTGCTGCCGCCGATCGCCAATTTCGCCATCGGCCTGCTCAAGGATACCTCGCTTGCCTCGGCCGTGGCTGCGCCGGAACTGAGCTTCCAGGCCCATATGCTCGCCGACCGCACCTTCCTGACCACGCAGATCTACCTGCTCGTGGCGCTGTTCTACCTGGCGATGAGCGTGCCCTTGTCATGGCTGTCGCGGCGGCTGGAGCGGCGCGCCTCACGCGGGGTGCGCGCATGA
PROTEIN sequence
Length: 224
MTDWARTYENLPYFLDALLTGAVMTAIVTAGGFIVSVLLGLVLAGCKTSRSRLLRTFAYIYVEIFRAVPVLTQLFVIYFGLGSIGIKLDPIPAAIIGFGLNGGAYLTEVFRAGIAAIDRGQSEAAIAIGMTRGMALRTIILPQTVRVVLPPIANFAIGLLKDTSLASAVAAPELSFQAHMLADRTFLTTQIYLLVALFYLAMSVPLSWLSRRLERRASRGVRA*