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scnpilot_solids2_trim150_scaffold_639_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_639_curated_1
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1202
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4Z4M3_9BURK
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_639_curated_2
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1205..2353
DNA (1149bp) protein (383aa)
acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16]
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Acetylornithine deacetylase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GV50_PUSST
scnpilot_solids2_trim150_scaffold_639_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2365..3693)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E5D6BE
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:KFC70546.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
agae1; D-amino acid dehydrogenase small subunit
scnpilot_solids2_trim150_scaffold_639_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3744..4340)
DNA (597bp) protein (199aa)
PuuR n=3 Tax=Pantoea ananas RepID=D4GEW6_PANAM
Putative transcriptional regulator {ECO:0000313|EMBL:KFC64706.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
puuR; PuuR
scnpilot_solids2_trim150_scaffold_639_curated_5
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4612..5568
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Pseudomonas veronii RepID=UPI000381714B
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHL34983.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;"
family 3 extracellular solute-binding protein
scnpilot_solids2_trim150_scaffold_639_curated_6
Pseudomonas cichorii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5678..6499
DNA (822bp) protein (274aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
arginine ABC transporter ATP-binding protein n=1 Tax=Pseudomonas veronii RepID=UPI00034B5AE0
Glutamine abc transporter ATP-binding protein {ECO:0000313|EMBL:AHF66531.1}; TaxID=1441629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cichorii JBC1.;"
scnpilot_solids2_trim150_scaffold_639_curated_7
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6496..7167
DNA (672bp) protein (224aa)
Amino acid ABC transporter permease n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H1M0_PSESX
Amino acid ABC transporter permease {ECO:0000313|EMBL:AHL34981.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;"
polar amino acid ABC transporter, permease protein
scnpilot_solids2_trim150_scaffold_639_curated_8
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7164..7856
DNA (693bp) protein (231aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Pseudomonas syringae Cit 7 RepID=F3H1L9_PSESX
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EGH53232.1}; TaxID=629264 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae Cit 7.;"
amino acid ABC transporter permease
scnpilot_solids2_trim150_scaffold_639_curated_9
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7991..8911
DNA (921bp) protein (307aa)
Putative 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:CCD98684.1}; EC=1.-.-.- {ECO:0000313|EMBL:CCD98684.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
ghrA1; glyoxylate/hydroxypyruvate reductase A (EC:1.1.1.79 1.1.1.81)
Putative 2-hydroxyacid dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SWV7_9BRAD
scnpilot_solids2_trim150_scaffold_639_curated_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9024..9875
DNA (852bp) protein (284aa)
Putative acetyltransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I6Q9_AZOC5
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:BAF88030.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_639_curated_11
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9883..11160)
DNA (1278bp) protein (426aa)
FAD dependent oxidoreductase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBY3_PARDP
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABL73027.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
scnpilot_solids2_trim150_scaffold_639_curated_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11169..11834)
DNA (666bp) protein (222aa)
dehalogenase protein
haloacid dehalogenase id=2984558 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Gluconobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_solids2_trim150_scaffold_639_curated_13
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12110..12964
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003722175
Putative acetyltransferase protein {ECO:0000313|EMBL:EAV41825.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_639_curated_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12961..13527
DNA (567bp) protein (189aa)
Probable transcriptional regulator protein (Leucine-responsive), AsnC family protein id=2984589 bin=GWF1_Rhodobacteraceae_65_7 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
AsnC family transcriptional regulator
Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_solids2_trim150_scaffold_639_curated_15
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13541..14929)
DNA (1389bp) protein (463aa)
Transcriptional regulator with HTH domain and aminotransferase domain containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SPU0_9RHIZ
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJJ27258.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_639_curated_16
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15052..15915
DNA (864bp) protein (288aa)
EamA-like transporter family n=1 Tax=Rhizobium sp. CF142 RepID=J2L181_9RHIZ
EamA-like transporter family {ECO:0000313|EMBL:EJJ27257.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
DMT superfamily inner membrane transporter protein
scnpilot_solids2_trim150_scaffold_639_curated_17
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16162..16632
DNA (471bp) protein (157aa)
Putative DctQ (C4-dicarboxylate permease, small subunit) TRAP n=1 Tax=Halomonas sp. HAL1 RepID=G4F4Q5_9GAMM
Putative DctQ (C4-dicarboxylate permease, small subunit) TRAP {ECO:0000313|EMBL:EHA16366.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
tripartite ATP-independent periplasmic transporter DctQ component
scnpilot_solids2_trim150_scaffold_639_curated_18
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16629..17900
DNA (1272bp) protein (424aa)
Putative TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Halomonas sp. HAL1 RepID=G4F4Q4_9GAMM
Putative TRAP C4-dicarboxylate transport system permease DctM subunit {ECO:0000313|EMBL:EHA16365.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
C4-dicarboxylate transport system permease large protein
scnpilot_solids2_trim150_scaffold_639_curated_19
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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17929..18921
DNA (993bp) protein (331aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Halomonas sp. HAL1 RepID=G4F4Q6_9GAMM
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EHA16367.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
TRAP dicarboxylate family transporter subunit DctP
scnpilot_solids2_trim150_scaffold_639_curated_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18988..19794
DNA (807bp) protein (269aa)
IclR family transcriptional regulator n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375456
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CDX56639.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
IclR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_639_curated_21
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19791..21014
DNA (1224bp) protein (408aa)
putative ALPHA METHYLACYL-COA RACEMASE (EC:5.1.99.4)
Putative ALPHA METHYLACYL-COA RACEMASE n=6 Tax=Vibrio nigripulchritudo RepID=U4K1E5_9VIBR
Carnitine dehydratase {ECO:0000313|EMBL:KIL41986.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
scnpilot_solids2_trim150_scaffold_639_curated_22
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21011..21793
DNA (783bp) protein (261aa)
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:CCV08521.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCV08521.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
enoyl-CoA hydratase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375102
enoyl-CoA hydratase/isomerase
scnpilot_solids2_trim150_scaffold_639_curated_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21790..22947
DNA (1158bp) protein (386aa)
UPI0003CDEFDD related cluster n=1 Tax=unknown RepID=UPI0003CDEFDD
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDX13103.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_639_curated_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22967..24130
DNA (1164bp) protein (388aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TB96_MESCW
Uncharacterized protein {ECO:0000313|EMBL:CDX42065.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_639_curated_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24143..27217)
DNA (3075bp) protein (1025aa)
Putative multidrug resistance protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U8D2_9RHIZ
Putative multidrug resistance protein {ECO:0000313|EMBL:ENN88834.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative RND efflux transporter
scnpilot_solids2_trim150_scaffold_639_curated_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27227..28360)
DNA (1134bp) protein (378aa)
Putative RND efflux transporter, MFP subunit n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWR5_RHITR
putative RND efflux transporter, MFP subunit
Putative RND efflux transporter, MFP subunit {ECO:0000313|EMBL:AGB75687.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
scnpilot_solids2_trim150_scaffold_639_curated_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28452..30077)
DNA (1626bp) protein (542aa)
pabB; para-aminobenzoate synthase, component I; K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003736906
Aminodeoxychorismate synthase, component I {ECO:0000313|EMBL:KFC72815.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying 27 items

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