ggKbase home page

scnpilot_solids2_trim150_scaffold_1527_curated_7

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(7361..9268)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 670.0
  • Bit_score: 485
  • Evalue 8.90e-134
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 623.0
  • Bit_score: 445
  • Evalue 3.00e-122
Pseudouridine synthase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X1F7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 578.0
  • Bit_score: 456
  • Evalue 4.10e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
ATGAAGGATCAAGACAAGGATAAGCGGCGCGGTGGCAAGCCCAGCGCGCCCAATCGTGGTTTTCGCGAGCGCCCGCCGGCCGCGAAAGGCCGCGCGCCAGCACGCGCCGGCGACGACCGCCCGCGACGCGCGCCCAGTGGCGACGACCGGCCGCAGCGTAAGTTCGATGGCGAGCGACCGCAACGCAGCCTTGGCGGGGACCGCCCGCAACGCAGCTTCGGGGACCGCCCGCAACGCAGCTTCGGTGCCCCCCCGCAGCGCGACGACCGGCGCCGGGACGACGCACCTGCGCCCGCCGCTGCGCGCCACGGCACCAGCTGGCGCGAGACGGCACGGCCTCTCTCCGGCACATCGGGCACGCCGGGCCTCGAGCGCATCGCCAAGGTGATGGCGCGCGCCGGCCTGTGCTCGCGGCGCGAGGCGGAGGAATGGATCACCGGCGGGCGCGTCAGCGTCAACGGAAAGCCGATCGATTCTCCGGCGCTCGATGTCGGGCCGCAGGACGTGATCCTGGTCGACAACAAGCCGCTGCCGGCGCGCGAGCGCACGCGGCTATGGCTCTACCACAAGCCGCGCGGGCTGGTGACGACGGCGGACGACCCCGAGGGGCGCGCCACCGTTTTCGACAACCTGCCGCCGGAATTGCCGCGCGTGATCTCGGTCGGCCGCCTCGATATCAATACCGAGGGGCTGCTGCTGCTGACCAACGATGGCGGCCTTGCGCGCGTGCTCGGCCACCCGAGCACCGGCTGGCTCCGGCGCTACCGCGTGCGCGCACATGGCAAGACGACGCAGGACGCGCTCGACGATCTGCGCCGGGGCGTCACGCTCGACGGCATCGATTACGAGCCGATCGTCGCCACGCTCGATCGCCAGAAGGGCGATAATTGCTGGCTGACCATGGACCTGACCGAGGGCAAGAACCGCGAGGTCAAGCGCATCCTCGAGCATCTCGGCCTTGCTGTCAGCCGGCTGATCCGCATCTCGTTCGGGCCGTTCCAGCTCGGCGATCTCGGCGAGGGCGCCATCGACGAGATCCGCACGCGCCAGATCAAGGACCAGCTCGGGCCACGGCTCGCCGAGGAGGCCGGCGTCGATTTCGACGCGCCGCTGTTCGGCGGTCACGAGGCCGTCGCGCCCTCCGACGAGCCGCGCCGCAAGCGCTATCTCTCGAAGGAAGGCTTTCAGGACCGGCGCCGCAAGGCGACCGCCGGCGAGGATGAGAACCTGAAGCTCGAGCTTGGCGCCGTCGCCGACCGCAAGGGCCGCACCGTCAAGGTCGAGCGCATCAAGGTCATCGAGCCCGAGGTGGAGGAGACGTCCCGCCAGCCGCGCGGCGACCGGCCGCAACGGGCGCATGGCGGCTTTGGCGGCGGCGCGCCCCGGCAAGGCCGTGGACGCCCGGACGGCGACCGACCGCAACGGAGCTTCGGCGACCGCCCGCAAGGCTCGCGCTCCGAAGGCGGCCGTCCGCAAAGTGGCAGGCCCGGCGGCTTTGGCGGCGGCGGGCCACGCGGCGGGCGTTCCGAGGGCGGTTACTCCGGCGGCCGGAGCTTCGGCGGCGACAGGCCGCAGCGTAGTTTTGGCGGCCGGCCGCAGGGTTCGCGCCCGGAGGGGGGCCGTCCGCAAGGCGGCAGGCCCGGCGGTTTCGGCGGCGGCGGGCCACGCGGCGAGCGTTCCGAGGGTGGCTACTCCGGTGGCCGGAGCTTCGGCGGCGACAGGCCGCAGCGCAGTTTCGGCGACCGGCCGCAGGGCGGCAGGCCCGGTGGCTTCGGTGCCGGCAGGCCGGGCGGTAAATTCGGCGGCGGCAAACCCGGTGGAGGCAAGCCGTTTGGTGGGCGCCCCGGCGGCGGAAGATCACCCGGTGGCCGGCCACCCGGCGGGAAACCGCCGCGCCGCAACGGCTAG
PROTEIN sequence
Length: 636
MKDQDKDKRRGGKPSAPNRGFRERPPAAKGRAPARAGDDRPRRAPSGDDRPQRKFDGERPQRSLGGDRPQRSFGDRPQRSFGAPPQRDDRRRDDAPAPAAARHGTSWRETARPLSGTSGTPGLERIAKVMARAGLCSRREAEEWITGGRVSVNGKPIDSPALDVGPQDVILVDNKPLPARERTRLWLYHKPRGLVTTADDPEGRATVFDNLPPELPRVISVGRLDINTEGLLLLTNDGGLARVLGHPSTGWLRRYRVRAHGKTTQDALDDLRRGVTLDGIDYEPIVATLDRQKGDNCWLTMDLTEGKNREVKRILEHLGLAVSRLIRISFGPFQLGDLGEGAIDEIRTRQIKDQLGPRLAEEAGVDFDAPLFGGHEAVAPSDEPRRKRYLSKEGFQDRRRKATAGEDENLKLELGAVADRKGRTVKVERIKVIEPEVEETSRQPRGDRPQRAHGGFGGGAPRQGRGRPDGDRPQRSFGDRPQGSRSEGGRPQSGRPGGFGGGGPRGGRSEGGYSGGRSFGGDRPQRSFGGRPQGSRPEGGRPQGGRPGGFGGGGPRGERSEGGYSGGRSFGGDRPQRSFGDRPQGGRPGGFGAGRPGGKFGGGKPGGGKPFGGRPGGGRSPGGRPPGGKPPRRNG*