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scnpilot_solids2_trim150_scaffold_1527_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1527_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..2118)
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I0N3_RHOVT
Putative membrane protein {ECO:0000313|EMBL:KFC67096.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1527_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2397..3701
DNA (1305bp) protein (435aa)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPJ7_9RHIZ
scnpilot_solids2_trim150_scaffold_1527_curated_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3707..5548
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003631399
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL
scnpilot_solids2_trim150_scaffold_1527_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5627..5911
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKL3_BEII9
Uncharacterized protein {ECO:0000313|EMBL:KFC74605.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1527_curated_5
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5915..6631)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z6N7_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM89049.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
scnpilot_solids2_trim150_scaffold_1527_curated_6
bacterium YEK0313, Bacteria

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comp(6797..7354)
DNA (558bp) protein (186aa)
methyltransferase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363F42C
Ribosomal RNA small subunit methyltransferase D {ECO:0000313|EMBL:CEJ15445.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_1527_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7361..9268)
DNA (1908bp) protein (636aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X1F7_9RHIZ
scnpilot_solids2_trim150_scaffold_1527_curated_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9313..9771
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Cytosine/adenosine deaminase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV18_9RHIZ
zinc-binding CMP/dCMP deaminase
scnpilot_solids2_trim150_scaffold_1527_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9787..10611)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031313BE
Putative esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:KFC75309.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
patatin; K07001 NTE family protein
scnpilot_solids2_trim150_scaffold_1527_curated_10
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10608..11405)
DNA (798bp) protein (266aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003694670
scnpilot_solids2_trim150_scaffold_1527_curated_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11521..11997
DNA (477bp) protein (159aa)
Putative signal peptide protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WMI1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67245.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1527_curated_12
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11994..12953
DNA (960bp) protein (320aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z835_METPB
scnpilot_solids2_trim150_scaffold_1527_curated_13
unknown

Not on your lists

comp(12885..13349)
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1527_curated_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13673..14467
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CF47B
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EIM27819.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
inositol monophosphatase
scnpilot_solids2_trim150_scaffold_1527_curated_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14517..14753
DNA (237bp) protein (79aa)
inositol monophosphatase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003162DC1
Uncharacterized protein {ECO:0000313|EMBL:CDX62707.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1527_curated_16
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14762..15103
DNA (342bp) protein (114aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036DC05F
Uncharacterized protein {ECO:0000313|EMBL:KFG67241.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein; K09778 hypothetical protein
Displaying 16 items

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