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scnpilot_solids2_trim150_scaffold_1415_curated_4

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(4602..5798)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EKM3_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 382.0
  • Bit_score: 458
  • Evalue 5.20e-126
Secretion protein HlyD {ECO:0000313|EMBL:KFC61615.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 376.0
  • Bit_score: 480
  • Evalue 3.10e-132
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 382.0
  • Bit_score: 458
  • Evalue 1.60e-126

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGCTGCATCGCAACAAGTTTATTCTGCCGGGGACACCCGCAATGACACGATTCTTTTCTCTTCCGCTGGTTGCCGTCGCGGTGGCGGGCCTGTCATTTTCCACCTTTGGCGCCCTCGCTCAGGGTGCCCCACCCGCGCCGCCAGTGACCGTCGCCGCGCCACTCGCCAGAAAAGTGGCGCAATGGGACGAATATACCGGGCGTTTCGAGGCAGCCTCGCATGTCGAGATCCGCGCGCGGGTATCCGGCTTCATTGACAAGGTCGCCTTTACGGATGGCGCGCTCGTCAAGAAGGGCGACCTTTTATTCGTCATCGACCAGCGCCCTTATCGCATTGCGGTAGAAGCGGCGCGCGCCGATGTCGCAAAAGCGAAGGCGCAGGTCGACGTGGCGCAAACCGATGTCGGGCGCGCCAACTCCCTCCAGCAATCGCATGTGCTGAGCCAGCGCGACATCGACCAGCGCCGCGCCACGCTCAACGTCGCCAAGGCGACGGCGCTGGCGGCGGAGGCCGAACTCGACACCGCCGAACTCAACCTCGCATGGACCGAGGTGCGCGCGCCGATCAGCGGCCGCATCTCGGACAAGAAGGTCGATGTCGGCAACCTGATCTCGGGCGGACAGGCCGGGGCGACATTGCTGACCACCATCGTCAGCACCGACCCGATCAACTTCGTGTTCGAGGCGTCCGAAGCCGATTACGTGCGCTACAGCCGGCTCGCCAAGGAAGGAGCGCGGCCGTCATCGCGCGAGGCGCCCACGCCCGTGCAGGTCAGGCTGTCCGACAAGAGCCAGTGGGATCGTACCGGCGCGATGGACTTTCTCGACAATCAGGTCAATCCGCGCTCGGGCACGATCCGCGGCCGCGCGGTGTTCGCCAACCACGACAACTTCCTGACGCCGGGCACGTTCGGGCGCATGCGGCTGTTCGGCGGCGACATCGAAGCCCTGATGGTGCCCGATGCCTCCATCGTCGCCGATCAGGCCCGCAAGATCGTGATGGTGGTCGGCCCCGACAGCAAGGTCGTCGGCAAGCCGGTGACGCTCGGCCCGATCATCGATGGGCTACGCGTCGTGCGTAGCGGCCTGTCGCGCGACGACAAGGTGATCATCACCGGCCTCGCCAACCCATTCGTGCGGCCCGGCGTGCAGGTCGTGGTCCAGGCCGGCACCATCCAGCTCGCAGCCACCAACTGA
PROTEIN sequence
Length: 399
MLHRNKFILPGTPAMTRFFSLPLVAVAVAGLSFSTFGALAQGAPPAPPVTVAAPLARKVAQWDEYTGRFEAASHVEIRARVSGFIDKVAFTDGALVKKGDLLFVIDQRPYRIAVEAARADVAKAKAQVDVAQTDVGRANSLQQSHVLSQRDIDQRRATLNVAKATALAAEAELDTAELNLAWTEVRAPISGRISDKKVDVGNLISGGQAGATLLTTIVSTDPINFVFEASEADYVRYSRLAKEGARPSSREAPTPVQVRLSDKSQWDRTGAMDFLDNQVNPRSGTIRGRAVFANHDNFLTPGTFGRMRLFGGDIEALMVPDASIVADQARKIVMVVGPDSKVVGKPVTLGPIIDGLRVVRSGLSRDDKVIITGLANPFVRPGVQVVVQAGTIQLAATN*