ggKbase home page

scnpilot_solids2_trim150_scaffold_679_curated_16

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 17004..17867

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMG0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 290.0
  • Bit_score: 390
  • Evalue 1.60e-105
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 290.0
  • Bit_score: 393
  • Evalue 2.10e-106
rpoH2; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 294.0
  • Bit_score: 387
  • Evalue 3.30e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGACACAGCTTACCGGTTTACGGCGGCAATTCGTACGGGCGGCGATGAGCGCGCCTTTCCTGTCCCGCGACGAGGAACGATCCCTCGCCGTGAGTTGGCGCGAGCACCATGACCGCAAGGCGCTCGACCGCCTCACCGGCGCGCATATGCGCCTGGTGATCGCGCTTGCCGCGCGCTTCAGGAATTACGGGTTGTCGGCCGCCGACCTGATTCAGGAAGGCCATGTCGGCCTGCTCGAGGCCGCCGCCCGCTTCGAGCCCGAGCGCGAGGTGCGTTTCTCGACCTATGCGACATGGTGGATCCGTGCCTCGATGCAGGATTACGTGCTGCGCAACTGGTCGATCGTGCGCGGCGGCACCAGTTCGGGCCAGAAGGCGCTGTTCTTCAACCTGCGCCGCATTCGCGCCAAGCTGCTGCAGGATGGCGGCGAGATCGACCTGACCGGACGCATCGCCAGCGAGATCGGCGTGTCGCGCGGCGACGTGCAGGCGATGGAGGCCCGGCTCGCCGGCGCCGATATCTCCCTCAACGCGCCGCTCAGCGACGCCGATGGCTCCGGGCTCAGCGAAAGGCAGGATTTCCTGGTCGACAGCACGCCGCTGCCGGACGAACTCGTCGGGCGCAGCATCGATACCGAGCGCCGCCTGAAATGGCTCGACCAGGCCTTGCACAGCCTGAACGAACGCGAGCTGAGCATCCTGCGCGAACGCCGGCTGCGCGACGATGCCGCCACCCTCGAGGCGCTCGGCTCGCGCATGGGCATTTCCAAGGAGCGCGTGCGCCAGATCGAGAACCGCGCGCTCGAAAAGCTGAAACGCGTCCTGCTCGACCGCCACCACGACGGCGCGCAGGCCTTCGTGTAA
PROTEIN sequence
Length: 288
MTQLTGLRRQFVRAAMSAPFLSRDEERSLAVSWREHHDRKALDRLTGAHMRLVIALAARFRNYGLSAADLIQEGHVGLLEAAARFEPEREVRFSTYATWWIRASMQDYVLRNWSIVRGGTSSGQKALFFNLRRIRAKLLQDGGEIDLTGRIASEIGVSRGDVQAMEARLAGADISLNAPLSDADGSGLSERQDFLVDSTPLPDELVGRSIDTERRLKWLDQALHSLNERELSILRERRLRDDAATLEALGSRMGISKERVRQIENRALEKLKRVLLDRHHDGAQAFV*