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scnpilot_solids2_trim150_scaffold_1366_curated_13

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(11500..12516)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 338.0
  • Bit_score: 591
  • Evalue 1.00e-165
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 338.0
  • Bit_score: 587
  • Evalue 2.00e-165
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWD2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 338.0
  • Bit_score: 591
  • Evalue 7.40e-166

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGATCCAGAAGAACTGGCAAGAACTGATCAAGCCGACCAAGCTCGAGATCGTCGGTGGCGACGATGCCAAGCGCAATGCGACCCTCGTCGCGGAGCCGCTGGAGCGCGGCTTCGGGTTGACGCTGGGCAATGCGCTCCGGCGCATCCTGCTGTCGTCGCTGCAAGGCGCCGCCGTGACCGCGATGCAGATCGACGGCGTGGTGCACGAATTCTCGTCGATCCCCGGCGTGCGCGAGGATGTCACCGACATCGTGCTCAACGTCAAGGACATCGCCATCAAGATGCAGGGCGACGGCCCGAAGCGCATGACGCTGCGCAAGACCGGGCCGGGCACGGTGACGGCGGGCGACATCAATGTCGTCGGCGACATCGAGGTGCTCAATCCGGAACTGGCGCTGTGCACGCTCGATGACGGCGCCGAGATCCGCATCGAATTCACCGTCGATACCGGCAAGGGCTACGTGCCGGCCGAGCGCAACCGCGCCGAGGATGCGCCGATCGGGCTGATCCCGGTCGACAGCCTGTATTCGCCGGTGCGCAAGGTATCGTACCGCGTCGAGAACACCCGCTCGGGCCAGGTGCTCGACTATGACAAGCTGACCATGGCGGTCGAGACCGACGGTTCGATCACGCCGGAAGACGCGGTCGCCTATGCCGCGCGCATCCTGCAGGACCAGCTCGACGTGTTCCTCAACTTCGAGGAGCCGAAGCGCGAGGAGACGGCGCCGGCCATTCCGGAGCTCGCCTTCAACCCGGCGCTGCTCAAGAAGGTCGACGAACTCGAACTGTCGGTGCGTTCGGCCAACTGCCTGAAGAACGACAACATCGTCTATATCGGCGACCTGATCCAGAAGACGGAAGCCGAGATGCTGCGCACGCCGAACTTCGGCCGCAAGTCGCTCAATGAGATCAAGGAAGTGCTGGCGCAAATGGGCCTGCACCTCGGCATGGATGTCAGCGGTTGGCCGCCGGAGAACATCGAAGAGTTGGCCAAGCGTTTCGAAGAACACTACTGA
PROTEIN sequence
Length: 339
VIQKNWQELIKPTKLEIVGGDDAKRNATLVAEPLERGFGLTLGNALRRILLSSLQGAAVTAMQIDGVVHEFSSIPGVREDVTDIVLNVKDIAIKMQGDGPKRMTLRKTGPGTVTAGDINVVGDIEVLNPELALCTLDDGAEIRIEFTVDTGKGYVPAERNRAEDAPIGLIPVDSLYSPVRKVSYRVENTRSGQVLDYDKLTMAVETDGSITPEDAVAYAARILQDQLDVFLNFEEPKREETAPAIPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMDVSGWPPENIEELAKRFEEHY*