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scnpilot_solids2_trim150_scaffold_1366_curated_15

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(13095..13463)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLB8_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 122.0
  • Bit_score: 218
  • Evalue 2.80e-54
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 122.0
  • Bit_score: 218
  • Evalue 8.80e-55
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 122.0
  • Bit_score: 218
  • Evalue 3.90e-54

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCTCGTATCGCCGGCGTAAACTTGCCAACCCAGAAGCGCGTGGTCATCGCGCTGCGTTACATTCACGGCATCGGCCCGAACAAGTCGGCCGAGATTTGCGAGAAGGTCGGCATCCCCGCCGATCGCCGCATCAACCAGTTGACCGATGCCGAGATCCTCGCGATCCGCGAGACGATCGATCGCGATTACGTCGTCGAGGGCGACCTGCGCCGCGACACCGCGATGAACATCAAGCGCTTGATGGATCTTGGCTGCTATCGCGGCCTGCGTCATCGCCGTGGCCTGCCGGTGCGTGGCCAGCGCACGCATACCAATGCGCGCACCCGCAAGGGCAAGCCGAAGGCGATCGCCGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 123
VARIAGVNLPTQKRVVIALRYIHGIGPNKSAEICEKVGIPADRRINQLTDAEILAIRETIDRDYVVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKPKAIAGKKK*