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scnpilot_solids2_trim150_scaffold_3304_curated_2

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 397..864

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhodovulum sp. PH10 RepID=J6IX89_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 157.0
  • Bit_score: 166
  • Evalue 2.10e-38
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 157.0
  • Bit_score: 166
  • Evalue 2.90e-38
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 156.0
  • Bit_score: 164
  • Evalue 2.50e-38

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
GTGCGCGGCGAGGTGCGGGTCAAGTCGTATACGGCTGACCCGGCCGATCTCGGCCGCTACGGCGCGCTGAGCGCAGAGGATGGCCGCCGCTTCGAGGTGCTTTCGATCCGGCCCGCCAAGGATGTTGTCGTCGTGCGCTTCAAGGGGCTCGACGACCGCAATGCGGTGGAAGCGCTGAACGGCGTCAAGCTGTTCGTCGCCCGCGCCGTGCTGCCGCCGCCCGAGGACGAGGACGAGTTCCTGCATGCCGATCTGATCGGGCTCAGGGCCGAGACCGAACAGGGCGAGGAACTCGGCCGTGTCAGTGCCGTGCACAATTTCGGTGGCGGCGACATGGTGGAGGTGCAGCCGGCCAAGGGGCCGAGCCTGCTGTTTGCCTTCACGCGCGCGATCGTGCCGGTGATCGATATCGCCGGCGGGCGCGTCGTCATCGTGCCGCCGCATGAGGAAGAGGTGCCGGGGGAATAG
PROTEIN sequence
Length: 156
VRGEVRVKSYTADPADLGRYGALSAEDGRRFEVLSIRPAKDVVVVRFKGLDDRNAVEALNGVKLFVARAVLPPPEDEDEFLHADLIGLRAETEQGEELGRVSAVHNFGGGDMVEVQPAKGPSLLFAFTRAIVPVIDIAGGRVVIVPPHEEEVPGE*