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scnpilot_solids2_trim150_scaffold_3304_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3304_curated_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..326
DNA (324bp) protein (108aa)
30S ribosomal protein S16 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RS16_PARL1
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_3304_curated_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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397..864
DNA (468bp) protein (156aa)
Ribosome maturation factor RimM n=1 Tax=Rhodovulum sp. PH10 RepID=J6IX89_9RHOB
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
scnpilot_solids2_trim150_scaffold_3304_curated_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1036..1980)
DNA (945bp) protein (315aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthetase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E4BEB4
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:BAF86729.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_3304_curated_4
bacterium YEK0313, Bacteria

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2171..3877
DNA (1707bp) protein (569aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ86_STAND
L-arabonate dehydratase {ECO:0000313|EMBL:CEJ15230.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_3304_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3890..4312
DNA (423bp) protein (141aa)
preprotein translocase subunit TatC n=1 Tax=Afipia birgiae RepID=UPI0003159C75
Uncharacterized protein {ECO:0000313|EMBL:KFC73925.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SEC-independent protein translocase protein TatC; K06886 hemoglobin
scnpilot_solids2_trim150_scaffold_3304_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4309..5019
DNA (711bp) protein (237aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X0I0_9RHIZ
scnpilot_solids2_trim150_scaffold_3304_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5096..5485
DNA (390bp) protein (130aa)
50S ribosomal protein L19 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=RL19_METSB
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_3304_curated_8
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5596..7248)
DNA (1653bp) protein (551aa)
Probable potassium transport system protein kup n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJN1_BEII9
K potassium transporter; K03549 KUP system potassium uptake protein
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Displaying 8 items

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