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scnpilot_solids2_trim150_scaffold_2550_curated_16

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 15878..16633

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7G9_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 233.0
  • Bit_score: 262
  • Evalue 3.50e-67
AraC family transcriptional regulator {ECO:0000313|EMBL:KAI93303.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 233.0
  • Bit_score: 266
  • Evalue 4.40e-68
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 233.0
  • Bit_score: 262
  • Evalue 1.10e-67

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGTCCCGCAGCATTAACCGCGACGATTTCCAGCATATCGACCGCGCCATCGGCGCGATGGCGAAGGATTTTCCCGACCGGAGCCACACGGGCGAGCATTCGCATCCGCGCGGCCAGCTCCTGCACGCGGTCGAGGGCGTGATGCTGGCCCGCACCAGCACCGGCGCCTGGCTCGTGCCGCCGGGCTTCGCGCTGTGGATCCCGCCCGGGCGGCCGCATAATGTCGAGATGCGCGGCAAGGTCTCGATGCGCACCATCTATCTGCGTCAGGACGAGGCCCGGCGCATGGCGCCGCGCTGCCGGGTGATTCGCGTCGCGCCGCTGCTGCGCGAGGCAATCCTGGCGCTGGTCGAGGAGCCGCTGCTCTATGACGAGGCCGGGCGCGGCGGGCACCTGGCGGCGCTCGTCATCGACGAGATCGACCGCGCGCCGACCGAGATGCTCGAACTGCCGCTGCCATCCGATGCGAAACTGCTCCGGGTGTGCGAGGCGCTGATCGCCGATCCGGGCAGCGCGCGCGATCTCGACGGCTGGGCGGAATTCGCCAGTCTCAGCCGCCGCAGCCTGTCGCGCGGGTTTCGCGACGAAACCGGGCTGTCGCTCGGCGCGTGGCGCCGCAAACTGCGCACCCTCAACGCGCTTGGCCGGCTGGAGGGCGGCGCGAGCGTCGCCGAGACGGCGCATCGGCTGGGCTATCGCAGCGCCAGCGCCCTCACGGCGATGATCCGGCGCGAACGCCCGGCGCCACAAACCTGA
PROTEIN sequence
Length: 252
MSRSINRDDFQHIDRAIGAMAKDFPDRSHTGEHSHPRGQLLHAVEGVMLARTSTGAWLVPPGFALWIPPGRPHNVEMRGKVSMRTIYLRQDEARRMAPRCRVIRVAPLLREAILALVEEPLLYDEAGRGGHLAALVIDEIDRAPTEMLELPLPSDAKLLRVCEALIADPGSARDLDGWAEFASLSRRSLSRGFRDETGLSLGAWRRKLRTLNALGRLEGGASVAETAHRLGYRSASALTAMIRRERPAPQT*