ggKbase home page

scnpilot_solids2_trim150_scaffold_5064_curated

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5064_curated_1
unknown

Not on your lists

comp(3..365)
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5064_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(392..748)
DNA (357bp) protein (119aa)
UPF0102 protein UU7_14093 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVE8_9GAMM
UPF0102 protein UU7_14093 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TIGR00252 family protein
scnpilot_solids2_trim150_scaffold_5064_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(748..2676)
DNA (1929bp) protein (643aa)
Putative lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJS3_9GAMM
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AGG90347.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5064_curated_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2730..3578
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXL3_9GAMM
putative S-adenosylmethionine-dependent methyltransferase, YraL family
Displaying 4 items

View Taxonomy