ggKbase home page

scnpilot_solids2_trim150_scaffold_3685_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3685_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..3786
DNA (3786bp) protein (1262aa)
Hemagglutinin/hemolysin (Fragment) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G5_9GAMM
Hemagglutinin/hemolysin {ECO:0000313|EMBL:EIL94006.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
yapH; filamentous hemagglutinin-like protein; K07279 hypothetical protein
scnpilot_solids2_trim150_scaffold_3685_curated_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3765..4916
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G6_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4941..5975)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94008.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type VI secretion-associated protein, ImpA family; K11902 type VI secretion system protein ImpA
scnpilot_solids2_trim150_scaffold_3685_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6066..6620)
DNA (555bp) protein (185aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H0_9GAMM
Putative oxidoreductase {ECO:0000313|EMBL:EIL94011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADPH-dependent FMN reductase
scnpilot_solids2_trim150_scaffold_3685_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6664..7605
DNA (942bp) protein (314aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYQ5_9GAMM
scnpilot_solids2_trim150_scaffold_3685_curated_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7707..8060
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU29_9GAMM
transcriptional regulator, Spx/MgsR family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8068..8559
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU30_9GAMM
putative small integral membrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8562..9623
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94015.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3685_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9666..10805
DNA (1140bp) protein (380aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H5_9GAMM
scnpilot_solids2_trim150_scaffold_3685_curated_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10890..11093)
DNA (204bp) protein (68aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU32_9GAMM
twin arginine-targeting protein translocase, TatA/E family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11108..11749)
DNA (642bp) protein (214aa)
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I1_9GAMM
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL {ECO:0000313|EMBL:EIL94022.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative lipoprotein involved in nitrous oxide reduction
scnpilot_solids2_trim150_scaffold_3685_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11762..12595)
DNA (834bp) protein (278aa)
Multi-copper enzyme maturation ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I2_9GAMM
Multi-copper enzyme maturation ABC transporter permease {ECO:0000313|EMBL:EIL94023.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
scnpilot_solids2_trim150_scaffold_3685_curated_13
Neisseria sp. HMSC06F02, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12615..13559
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M6C9_NEISI
Uncharacterized protein {ECO:0000313|EMBL:KJJ18721.1}; TaxID=1581124 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sp. HMSC06F02.;"
scnpilot_solids2_trim150_scaffold_3685_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13472..15346)
DNA (1875bp) protein (625aa)
Nitrous oxidase accessory protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQH3_9GAMM
nitrous oxidase accessory protein
Nitrous oxidase accessory protein {ECO:0000313|EMBL:AGG89851.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3685_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15400..15486)
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93611.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TIGR00255 family protein
Displaying 15 items

View Taxonomy