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scnpilot_solids2_trim150_scaffold_2816_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2816_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(93..548)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWU3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89549.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

676..2079
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD81_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97422.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane-bound serine protease (ClpP class)
scnpilot_solids2_trim150_scaffold_2816_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2101..2877
DNA (777bp) protein (259aa)
Membrane protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WWU1_9GAMM
membrane protease subunit, stomatin/prohibitin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2816_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2899..3753
DNA (855bp) protein (285aa)
Precorrin-3B methylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NPH4_9GAMM
precorrin-3B methylase
Precorrin-3B methylase {ECO:0000313|EMBL:AGG89546.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3865..4161
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89542.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4211..5989
DNA (1779bp) protein (593aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPG8_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG89541.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6606..6911
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT6_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2816_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..8693
DNA (1779bp) protein (593aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD76_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2816_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8788..10473
DNA (1686bp) protein (562aa)
Peptidase M28 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD72_9GAMM
Peptidase M28 {ECO:0000313|EMBL:EIL97413.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative aminopeptidase
scnpilot_solids2_trim150_scaffold_2816_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10617..13370)
DNA (2754bp) protein (918aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD71_9GAMM
Putative lipoprotein {ECO:0000313|EMBL:EIL97412.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zinc carboxypeptidase
scnpilot_solids2_trim150_scaffold_2816_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13525..15510)
DNA (1986bp) protein (662aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD70_9GAMM
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL97411.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids2_trim150_scaffold_2816_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15691..16143)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94756.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2816_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16329..17198)
DNA (870bp) protein (290aa)
Thioredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L6_9GAMM
Thioredoxin {ECO:0000313|EMBL:EIL94757.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thioredoxin
scnpilot_solids2_trim150_scaffold_2816_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17318..17965
DNA (648bp) protein (216aa)
Putative paraquat-inducible protein A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQL6_9GAMM
Putative paraquat-inducible protein A {ECO:0000313|EMBL:EIM01758.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative paraquat-inducible protein A
scnpilot_solids2_trim150_scaffold_2816_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17962..18615
DNA (654bp) protein (218aa)
Putative paraquat-inducible protein A n=1 Tax=Rhodanobacter denitrificans RepID=I4WTF2_9GAMM
Putative paraquat-inducible protein A {ECO:0000313|EMBL:EIM01759.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative paraquat-inducible protein A
scnpilot_solids2_trim150_scaffold_2816_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18608..20296
DNA (1689bp) protein (563aa)
PqiB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQL8_9GAMM
PqiB family protein {ECO:0000313|EMBL:EIM01760.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
qaraquat-inducible protein B
scnpilot_solids2_trim150_scaffold_2816_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20293..20901
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFA1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88288.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_curated_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21033..21452
DNA (420bp) protein (140aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQM0_9GAMM
Displaying 18 items

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