ggKbase home page

scnpilot_solids2_trim150_scaffold_3423_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3423_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130..1119
DNA (990bp) protein (330aa)
Serine/threonine protein kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHT9_9GAMM
putative homoserine kinase type II (protein kinase fold)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3423_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1225..1659
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHU2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87493.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3423_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1767..2939
DNA (1173bp) protein (391aa)
putative SAM-dependent methyltransferase (EC:2.1.1.-)
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:AGG87492.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGG87492.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative SAM-dependent methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCK7_9GAMM
scnpilot_solids2_trim150_scaffold_3423_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3051..4244)
DNA (1194bp) protein (398aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH92_9GAMM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIL98833.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD(P)H-nitrite reductase
scnpilot_solids2_trim150_scaffold_3423_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4370..5812
DNA (1443bp) protein (481aa)
RmuC domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH93_9GAMM
RmuC domain-containing protein {ECO:0000313|EMBL:EIL98834.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3423_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5816..6028)
DNA (213bp) protein (71aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2W9_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL93810.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
XRE family transcriptional regulator; K07729 putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_3423_curated_7
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6025..6669)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2X0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL35636.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
scnpilot_solids2_trim150_scaffold_3423_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6821..6979
DNA (159bp) protein (53aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDI4_9GAMM
GTP cyclohydrolase I
Displaying 8 items

View Taxonomy