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scnpilot_solids2_trim150_scaffold_3298_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3298_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1418)
DNA (1416bp) protein (472aa)
Elongation factor G n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSI1_9GAMM
translation elongation factor 2 (EF-2/EF-G)
Elongation factor G {ECO:0000313|EMBL:EIM02423.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3298_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1822..2694
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VM09_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88250.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3298_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2717..4516
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH50_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90280.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3298_curated_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4626..6089)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI2_9GAMM
GTPase of unknown function
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3298_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6228..6779
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCX3_9GAMM
protein of unknown function (DUF1905)
Uncharacterized protein {ECO:0000313|EMBL:AGG88555.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3298_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6818..10438
DNA (3621bp) protein (1207aa)
Two component system sensor-response regulator hybrid protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSL9_9GAMM
Two component system sensor-response regulator hybrid protein {ECO:0000313|EMBL:EIM02461.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_3298_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10578..14126
DNA (3549bp) protein (1183aa)
Signal transduction histidine kinase n=3 Tax=Rhodanobacter denitrificans RepID=M4NJN1_9GAMM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGG90312.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3298_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14233..14655)
DNA (423bp) protein (141aa)
DNA polymerase III, chi subunit (EC:2.7.7.7)
DNA polymerase III subunit chi n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI5_9GAMM
DNA polymerase III subunit chi {ECO:0000313|EMBL:EIL91226.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3298_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14748..16373)
DNA (1626bp) protein (542aa)
Probable cytosol aminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI6_9GAMM
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aminopeptidase A
scnpilot_solids2_trim150_scaffold_3298_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16496..17605
DNA (1110bp) protein (370aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI7_9GAMM
Putative permease {ECO:0000313|EMBL:EIL91228.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease
scnpilot_solids2_trim150_scaffold_3298_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17605..18705
DNA (1101bp) protein (367aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI8_9GAMM
Putative permease {ECO:0000313|EMBL:EIL91229.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease
scnpilot_solids2_trim150_scaffold_3298_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18769..19788
DNA (1020bp) protein (340aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI9_9GAMM
Threonine aldolase {ECO:0000313|EMBL:EIL91230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3298_curated_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19830..20915
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036516F1
Uncharacterized protein {ECO:0000313|EMBL:EGJ10646.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3298_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21056..22870
DNA (1815bp) protein (605aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Rhodanobacter denitrificans RepID=I4WQX8_9GAMM
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AGG90184.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3298_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23133..23948
DNA (816bp) protein (272aa)
Sugar transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4V8_9GAMM
Sugar transporter {ECO:0000313|EMBL:EIL94499.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MFS transporter, sugar porter family
Displaying 15 items

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