ggKbase home page

scnpilot_solids2_trim150_scaffold_4209_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4209_curated_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..249
DNA (249bp) protein (83aa)
Sugar ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB5_9GAMM
Sugar ABC transporter permease {ECO:0000313|EMBL:KJV36541.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
scnpilot_solids2_trim150_scaffold_4209_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(334..1167)
DNA (834bp) protein (278aa)
Pirin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC35_9GAMM
Pirin {ECO:0000313|EMBL:EIL97026.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pirin-related protein
scnpilot_solids2_trim150_scaffold_4209_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1271..2017)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMZ1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90983.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4209_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2105..2782)
DNA (678bp) protein (226aa)
YecA family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJC8_9GAMM
yecA family protein
YecA family protein {ECO:0000313|EMBL:AGG90984.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4209_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2788..3555)
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUE6_9GAMM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL90837.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_4209_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3773..3982
DNA (210bp) protein (70aa)
Cold acclimation protein B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC31_9GAMM
Cold acclimation protein B {ECO:0000313|EMBL:EIL97022.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cold shock protein
scnpilot_solids2_trim150_scaffold_4209_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4146..6203)
DNA (2058bp) protein (686aa)
Zn-dependent oligopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNA9_9GAMM
Zn-dependent oligopeptidase {ECO:0000313|EMBL:AGG90987.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Zn-dependent oligopeptidase
scnpilot_solids2_trim150_scaffold_4209_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6297..6830
DNA (534bp) protein (178aa)
Transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC29_9GAMM
Transferase {ECO:0000313|EMBL:EIL97020.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase
scnpilot_solids2_trim150_scaffold_4209_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6830..7159
DNA (330bp) protein (110aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Burkholderia cenocepacia PC184 RepID=A2VQE2_9BURK
low molecular weight phosphotyrosine protein phosphatase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4209_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7167..7709)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJD2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90989.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4209_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7832..8662)
DNA (831bp) protein (277aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM
scnpilot_solids2_trim150_scaffold_4209_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8779..9039
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCI3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90992.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4209_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9044..9796)
DNA (753bp) protein (251aa)
Glutathione synthase/ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC91_9GAMM
Glutathione synthase/ribosomal protein S6 modification protein {ECO:0000313|EMBL:EIL97082.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)
Displaying 13 items

View Taxonomy