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scnpilot_solids2_trim150_scaffold_2425_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2425_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(287..1240)
DNA (954bp) protein (318aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC5_9GAMM
putative acyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2425_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1237..2433)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99915.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2425_curated_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2455..3213)
DNA (759bp) protein (253aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP57_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIL88998.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative permease
scnpilot_solids2_trim150_scaffold_2425_curated_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3354..5228
DNA (1875bp) protein (625aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) flavoprotein, alpha-component (EC:1.8.1.2)
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP58_9GAMM
scnpilot_solids2_trim150_scaffold_2425_curated_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5312..7006
DNA (1695bp) protein (565aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sulfite reductase (NADPH) hemoprotein, beta-component (EC:1.8.1.2)
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP59_9GAMM
scnpilot_solids2_trim150_scaffold_2425_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7003..7722
DNA (720bp) protein (240aa)
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00055482}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00089161};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xant
Phosphoadenosine phosphosulfate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVD6_9GAMM
scnpilot_solids2_trim150_scaffold_2425_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7805..8746)
DNA (942bp) protein (314aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFR0_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AGG88458.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2425_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8895..9257
DNA (363bp) protein (121aa)
PadR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W639_9GAMM
PadR family transcriptional regulator {ECO:0000313|EMBL:EIL94930.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_2425_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9254..9886
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347448A
Sensor protein {ECO:0000313|EMBL:EIL94931.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sensor protein
Displaying 9 items

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