ggKbase home page

scnpilot_solids2_trim150_scaffold_2333_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2333_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25..624
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKW1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90318.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2333_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

626..1198
DNA (573bp) protein (191aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVH6_9GAMM
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EIL91217.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP:cob(I)alamin adenosyltransferase
scnpilot_solids2_trim150_scaffold_2333_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1207..2127
DNA (921bp) protein (307aa)
Histone deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVM7_9GAMM
deacetylase, histone deacetylase/acetoin utilization protein
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:AGG90320.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2333_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2225..4627
DNA (2403bp) protein (801aa)
LPS-assembly protein LptD n=1 Tax=Rhodanobacter denitrificans RepID=M4NS02_9GAMM
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
organic solvent tolerance protein OstA
scnpilot_solids2_trim150_scaffold_2333_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4661..6010
DNA (1350bp) protein (450aa)
Chaperone SurA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSK9_9GAMM
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
parvulin-like peptidyl-prolyl isomerase
scnpilot_solids2_trim150_scaffold_2333_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6016..7014
DNA (999bp) protein (333aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSK8_9GAMM
scnpilot_solids2_trim150_scaffold_2333_curated_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7103..7894
DNA (792bp) protein (264aa)
dimethyladenosine transferase (EC:2.1.1.-)
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WK32_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2333_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7948..8331
DNA (384bp) protein (128aa)
Protein ApaG n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVH0_9GAMM
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein affecting Mg2+/Co2+ transport
scnpilot_solids2_trim150_scaffold_2333_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8347..9198
DNA (852bp) protein (284aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|SAAS:SAAS00088330};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Diadenosine tetraphosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG9_9GAMM
symmetrical bis(5'-nucleosyl)-tetraphosphatase
scnpilot_solids2_trim150_scaffold_2333_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9288..10835)
DNA (1548bp) protein (516aa)
Protein translocase subunit SecA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVG8_9GAMM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
preprotein translocase, SecA subunit
Displaying 10 items

View Taxonomy