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scnpilot_solids2_trim150_scaffold_2849_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2849_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..849)
DNA (849bp) protein (283aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPD1_9GAMM
scnpilot_solids2_trim150_scaffold_2849_curated_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(905..2233)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Two component system sensor protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBB6_9GAMM
two component system sensor protein
scnpilot_solids2_trim150_scaffold_2849_curated_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2305..2712
DNA (408bp) protein (136aa)
Response regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBB7_9GAMM
Response regulator {ECO:0000313|EMBL:EIL96758.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
response regulator
scnpilot_solids2_trim150_scaffold_2849_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2976..3533
DNA (558bp) protein (186aa)
Ketosteroid isomerase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W012_9GAMM
Ketosteroid isomerase-like protein {ECO:0000313|EMBL:EIL92803.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ketosteroid isomerase-like enzyme
scnpilot_solids2_trim150_scaffold_2849_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3583..5079
DNA (1497bp) protein (499aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.21 2.1.1.63)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:AGG89447.1}; EC=2.1.1.63 {ECO:0000313|EMBL:AGG89447.1};; EC=3.2.2.21 {ECO:0000313|EMBL:AGG89447.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NH75_9GAMM
scnpilot_solids2_trim150_scaffold_2849_curated_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5076..5609
DNA (534bp) protein (178aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGF5_9GAMM
O-6-methylguanine DNA methyltransferase
scnpilot_solids2_trim150_scaffold_2849_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5610..5975)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS12_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89449.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2849_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6078..7361
DNA (1284bp) protein (428aa)
Nucleotide pyrophosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS11_9GAMM
putative AP superfamily protein
Putative AP superfamily protein {ECO:0000313|EMBL:AGG89450.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2849_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7477..8745)
DNA (1269bp) protein (423aa)
Major facilitator family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W017_9GAMM
arabinose efflux permease family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2849_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8804..9250)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS09_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89452.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2849_curated_11
unknown

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comp(9352..9513)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003493F02
scnpilot_solids2_trim150_scaffold_2849_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9618..10985)
DNA (1368bp) protein (456aa)
formimidoylglutamate deiminase (EC:3.5.3.13)
N-formimino-L-glutamate deiminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W020_9GAMM
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:EIL92811.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_2849_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11067..12635
DNA (1569bp) protein (523aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W021_9GAMM
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:EIL92812.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative amidohydrolase
scnpilot_solids2_trim150_scaffold_2849_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12729..14186
DNA (1458bp) protein (486aa)
Chloride channel protein EriC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W022_9GAMM
Chloride channel protein EriC {ECO:0000313|EMBL:EIL92813.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chloride channel protein EriC
scnpilot_solids2_trim150_scaffold_2849_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14200..15237
DNA (1038bp) protein (346aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W023_9GAMM
Displaying 15 items

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