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scnpilot_solids2_trim150_scaffold_2434_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2434_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..564
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCC5_9GAMM
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
Uncharacterized protein {ECO:0000313|EMBL:EIL97116.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2434_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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720..965
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97115.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2434_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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986..2098
DNA (1113bp) protein (371aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Dyella ginsengisoli RepID=UPI0003486602
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AGG90691.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2434_curated_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2128..2859
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003492A32
Uncharacterized protein {ECO:0000313|EMBL:EIL93001.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2434_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2856..4121
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95409.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sterol desaturase
scnpilot_solids2_trim150_scaffold_2434_curated_6
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4486..6030
DNA (1545bp) protein (515aa)
amino acid permease n=1 Tax=Dyella ginsengisoli RepID=UPI00034D5F4B
Amino acid permease {ECO:0000313|EMBL:KGI76799.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
amino acid transporter
scnpilot_solids2_trim150_scaffold_2434_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6235..7317)
DNA (1083bp) protein (361aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBP1_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:EIL96882.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids2_trim150_scaffold_2434_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7558..9456
DNA (1899bp) protein (633aa)
Glycyl aminopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBP2_9GAMM
Glycyl aminopeptidase {ECO:0000313|EMBL:EIL96883.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycyl aminopeptidase
scnpilot_solids2_trim150_scaffold_2434_curated_9
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9870..10286
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TE38_RICCO
Uncharacterized protein {ECO:0000313|EMBL:AJC46822.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2434_curated_10
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10385..12715)
DNA (2331bp) protein (777aa)
dipeptidyl-peptidase (EC:3.4.14.-)
Peptidase S9, prolyl oligopeptidase active site region:peptidase S9B, dipeptidylpeptidase IV n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KK07_9GAMM
Peptidase S9, prolyl oligopeptidase active site region:peptidase S9B, dipeptidylpeptidase IV {ECO:0000313|EMBL:ERG47184.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra ATCC 29570.;"
scnpilot_solids2_trim150_scaffold_2434_curated_11
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12901..13665)
DNA (765bp) protein (255aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8SHY2_9SPHN
Scaffold7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31962.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
TonB-dependent receptor
Displaying 11 items

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