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scnpilot_solids2_trim150_scaffold_3761_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3761_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..603)
DNA (603bp) protein (201aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Acetate CoA-transferase YdiF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV45_9GAMM
3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit
scnpilot_solids2_trim150_scaffold_3761_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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759..1130
DNA (372bp) protein (124aa)
CopY family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV44_9GAMM
CopY family transcriptional regulator {ECO:0000313|EMBL:EIL91085.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_3761_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1117..2433
DNA (1317bp) protein (439aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ07_9GAMM
antirepressor regulating drug resistance protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3761_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2494..3546
DNA (1053bp) protein (351aa)
Asparaginase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBR6_9GAMM
asparaginase
Asparaginase {ECO:0000313|EMBL:AGG88049.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3761_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3634..4092)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV41_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91082.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3761_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4089..5255)
DNA (1167bp) protein (389aa)
Signal peptide protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV40_9GAMM
Signal peptide protein {ECO:0000313|EMBL:EIL91081.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3761_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5322..7610)
DNA (2289bp) protein (763aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDT8_9GAMM
outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AGG88052.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3761_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7704..8288)
DNA (585bp) protein (195aa)
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ02_9GAMM
response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein {ECO:0000313|EMBL:AGG88053.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3761_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8359..9651)
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ01_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_3761_curated_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9718..11268)
DNA (1551bp) protein (517aa)
Amino acid/peptide transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M5_9GAMM
Amino acid/peptide transporter {ECO:0000313|EMBL:EIL95816.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
scnpilot_solids2_trim150_scaffold_3761_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11586..11957
DNA (372bp) protein (124aa)
diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV35_9GAMM
Diacylglycerol kinase {ECO:0000313|EMBL:EIL91076.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3761_curated_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12031..12651
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV34_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3761_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12653..13498
DNA (846bp) protein (282aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ7_9GAMM
beta-propeller domain-containing protein, methanol dehydrogenase
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:AGG88058.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3761_curated_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13500..14003
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3761_curated_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14195..15079
DNA (885bp) protein (295aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZF8_9GAMM
prolipoprotein diacylglyceryl transferase
scnpilot_solids2_trim150_scaffold_3761_curated_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15224..15940)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ02_9GAMM
TIGR00266 family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 16 items

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