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scnpilot_solids2_trim150_scaffold_4249_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4249_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..171
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYP0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89874.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4249_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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244..1659
DNA (1416bp) protein (472aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYN9_9GAMM
putative exonuclease of the beta-lactamase fold involved in RNA processing
Putative exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:AGG89875.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4249_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1656..2510
DNA (855bp) protein (285aa)
TIGR00730 family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQK1_9GAMM
TIGR00730 family protein
TIGR00730 family protein {ECO:0000313|EMBL:AGG89876.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4249_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2574..3047
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU06_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02948.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Cytochrome C''
scnpilot_solids2_trim150_scaffold_4249_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3243..3665)
DNA (423bp) protein (141aa)
OsmC family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q8_9GAMM
OsmC family protein {ECO:0000313|EMBL:EIL93049.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative redox protein, regulator of disulfide bond formation
scnpilot_solids2_trim150_scaffold_4249_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3697..5076)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q7_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_4249_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5073..5747)
DNA (675bp) protein (225aa)
Two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q6_9GAMM
Two component transcriptional regulator {ECO:0000313|EMBL:EIL93047.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids2_trim150_scaffold_4249_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6003..6521)
DNA (519bp) protein (173aa)
Cytochrome B561 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q5_9GAMM
Cytochrome B561 {ECO:0000313|EMBL:EIL93046.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome b
scnpilot_solids2_trim150_scaffold_4249_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6552..6824)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93045.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4249_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6891..8171)
DNA (1281bp) protein (427aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU01_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:EIM02943.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids2_trim150_scaffold_4249_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8323..9714
DNA (1392bp) protein (464aa)
Putative exonuclease of the beta-lactamase fold involved in RNA processing n=1 Tax=Rhodanobacter denitrificans RepID=M4NIM4_9GAMM
putative exonuclease of the beta-lactamase fold involved in RNA processing
Putative exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:AGG89947.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4249_curated_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9870..10574
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWI7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91578.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
Displaying 12 items

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