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scnpilot_solids2_trim150_scaffold_2908_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2908_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1238
DNA (1236bp) protein (412aa)
Putative multicopper oxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM98_9GAMM
putative multicopper oxidase
Putative multicopper oxidase {ECO:0000313|EMBL:AGG88846.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2908_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1856..3142
DNA (1287bp) protein (429aa)
Putative outer membrane efflux protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ1_9GAMM
Putative outer membrane efflux protein {ECO:0000313|EMBL:EIM01183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane protein
scnpilot_solids2_trim150_scaffold_2908_curated_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3139..4437
DNA (1299bp) protein (433aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ9_9GAMM
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family {ECO:0000313|EMBL:EIL90340.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_2908_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4434..7610
DNA (3177bp) protein (1059aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Rhodanobacter denitrificans RepID=M4NMA6_9GAMM
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG88851.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids2_trim150_scaffold_2908_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7614..7964
DNA (351bp) protein (117aa)
Copper binding periplasmic protein CusF n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2908_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8004..8402)
DNA (399bp) protein (133aa)
MerR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL7_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG88855.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2908_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8443..8799
DNA (357bp) protein (119aa)
Mercuric transport protein MerT n=1 Tax=Rhodanobacter denitrificans RepID=I4WWL6_9GAMM
MerT mercuric transport protein
MerT mercuric transport protein {ECO:0000313|EMBL:AGG88856.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2908_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8810..9097
DNA (288bp) protein (96aa)
Copper chaperone n=1 Tax=Rhodanobacter denitrificans RepID=M4NFM6_9GAMM
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AGG88857.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2908_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9309..9929)
DNA (621bp) protein (207aa)
RND OM export protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNZ9_9GAMM
RND OM export protein {ECO:0000313|EMBL:EIM01191.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Co/Zn/Cd efflux system component
scnpilot_solids2_trim150_scaffold_2908_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9942..11801)
DNA (1860bp) protein (620aa)
Iron permease FTR1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP00_9GAMM
Iron permease FTR1 {ECO:0000313|EMBL:EIM01192.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
high-affinity Fe2+/Pb2+ permease
Displaying 10 items

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