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scnpilot_solids2_trim150_scaffold_796_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_796_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..263
DNA (261bp) protein (87aa)
Putative Mg2+ and Co2+ transporter CorC n=1 Tax=Rhodanobacter denitrificans RepID=M4NGL4_9GAMM
putative Mg2+ and Co2+ transporter CorC
Putative Mg2+ and Co2+ transporter CorC {ECO:0000313|EMBL:AGG90029.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272..1480
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGH0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90030.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1577..2545
DNA (969bp) protein (323aa)
Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLX9_9GAMM
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Mg2+/Co2+ transporter
scnpilot_solids2_trim150_scaffold_796_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2724..3083
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBM1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96862.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_796_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3287..3586)
DNA (300bp) protein (100aa)
Anti-anti-sigma regulatory factor n=2 Tax=Rhodanobacter RepID=I4WYE3_9GAMM
anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:AGG90035.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3596..4774)
DNA (1179bp) protein (393aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NR38_9GAMM
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGG90036.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4790..5881)
DNA (1092bp) protein (364aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYR3_9GAMM
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
scnpilot_solids2_trim150_scaffold_796_curated_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5981..6631)
DNA (651bp) protein (217aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBL5_9GAMM
chemotaxis protein
scnpilot_solids2_trim150_scaffold_796_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6631..7503)
DNA (873bp) protein (291aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Chemotaxis protein methyltransferase n=3 Tax=Rhodanobacter denitrificans RepID=M4NGM1_9GAMM
methylase of chemotaxis methyl-accepting protein
scnpilot_solids2_trim150_scaffold_796_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7506..9230)
DNA (1725bp) protein (575aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGH7_9GAMM
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGG90040.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9245..9751)
DNA (507bp) protein (169aa)
Chemotaxis signal transduction protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYR7_9GAMM
chemotaxis signal transduction protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_796_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9942..11654)
DNA (1713bp) protein (571aa)
Methyl-accepting chemotaxis protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NIY2_9GAMM
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGG90042.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11803..13833)
DNA (2031bp) protein (677aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Chemotaxis protein histidine kinase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBL0_9GAMM
chemotaxis protein histidine kinase-like protein
scnpilot_solids2_trim150_scaffold_796_curated_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13844..14206)
DNA (363bp) protein (121aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYS1_9GAMM
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EIL92362.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
scnpilot_solids2_trim150_scaffold_796_curated_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14221..14556)
DNA (336bp) protein (112aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Rhodanobacter denitrificans RepID=M4NGI3_9GAMM
anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_796_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14768..15967
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBK7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96848.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Flagellar hook-length control protein FliK
scnpilot_solids2_trim150_scaffold_796_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15964..16215
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBK6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL96847.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_796_curated_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16435..16788)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBK5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96846.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF2802)
scnpilot_solids2_trim150_scaffold_796_curated_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16778..17254)
DNA (477bp) protein (159aa)
Chemotaxis signal transduction protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBK4_9GAMM
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EIL96845.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chemotaxis signal transduction protein
scnpilot_solids2_trim150_scaffold_796_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17292..18308)
DNA (1017bp) protein (339aa)
Flagellar motor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGI6_9GAMM
flagellar motor protein
Flagellar motor protein {ECO:0000313|EMBL:AGG90050.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18305..19045)
DNA (741bp) protein (247aa)
Flagellar motor component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYS8_9GAMM
Flagellar motor component {ECO:0000313|EMBL:EIL92369.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flagellar motor component
scnpilot_solids2_trim150_scaffold_796_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19050..20912)
DNA (1863bp) protein (621aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Chemotaxis protein histidine kinase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIZ2_9GAMM
chemotaxis protein histidine kinase-like protein
scnpilot_solids2_trim150_scaffold_796_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20926..21570)
DNA (645bp) protein (215aa)
Protein phosphatase CheZ {ECO:0000256|PIRNR:PIRNR002884}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR002884};; Chemotaxis protein CheZ {ECO:0000256|PIRNR:PIRNR002884}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Chemotaxis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYY3_9GAMM
chemotaxis protein
scnpilot_solids2_trim150_scaffold_796_curated_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21567..21989)
DNA (423bp) protein (141aa)
Response regulator receiver protein n=2 Tax=Rhodanobacter denitrificans RepID=I4WYY4_9GAMM
Response regulator receiver protein {ECO:0000313|EMBL:EIL92372.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
scnpilot_solids2_trim150_scaffold_796_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22033..22761)
DNA (729bp) protein (243aa)
RNA polymerase sigma factor FliA n=1 Tax=Rhodanobacter denitrificans RepID=I4WYY5_9GAMM
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22758..23699)
DNA (942bp) protein (314aa)
Site-determining protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYY6_9GAMM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATPase involved in chromosome partitioning
scnpilot_solids2_trim150_scaffold_796_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23714..25000)
DNA (1287bp) protein (429aa)
Flagellar biosynthetic protein FlhF n=1 Tax=Rhodanobacter denitrificans RepID=U3GL36_9GAMM
flagellar biosynthetic protein FlhF
Flagellar biosynthetic protein FlhF {ECO:0000313|EMBL:AGG90057.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_796_curated_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25173..25574)
DNA (402bp) protein (134aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBC7_9GAMM
flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EIL96768.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 28 items

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