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scnpilot_solids2_trim150_scaffold_4886_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4886_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..529
DNA (528bp) protein (176aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WJV3_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG90677.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4886_curated_2
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(652..975)
DNA (324bp) protein (108aa)
VirBTraTrw family protein n=2 Tax=Enterobacter cloacae RepID=S7UFV2_ENTCL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW72551.1}; TaxID=1045856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae EcWSU1.;"
scnpilot_solids2_trim150_scaffold_4886_curated_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1409..3745
DNA (2337bp) protein (779aa)
Dipeptidyl peptidase IV n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR97_9GAMM
Dipeptidyl peptidase IV {ECO:0000313|EMBL:EIL89738.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids2_trim150_scaffold_4886_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3855..5783)
DNA (1929bp) protein (643aa)
Antirepressor regulating drug resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIE7_9GAMM
antirepressor regulating drug resistance protein
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AGG90674.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4886_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5785..6171)
DNA (387bp) protein (129aa)
Methicillin resistance protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W798_9GAMM
Methicillin resistance protein {ECO:0000313|EMBL:EIL95339.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_4886_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6271..6714)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W797_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95338.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4886_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6763..7632)
DNA (870bp) protein (290aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W796_9GAMM
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL95337.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_4886_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7667..8692)
DNA (1026bp) protein (342aa)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Rhodanobacter denitrificans RepID=I4WJW0_9GAMM
ribonucleotide reductase, beta subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4886_curated_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8708..8932)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR94_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89735.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4886_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8950..9858)
DNA (909bp) protein (303aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIE3_9GAMM
ribonucleoside-diphosphate reductase, alpha subunit
Displaying 10 items

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