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scnpilot_solids2_trim150_scaffold_2807_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2807_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..217
DNA (216bp) protein (72aa)
Chromosome partitioning protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC5_9GAMM
ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGG90971.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2807_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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221..1090
DNA (870bp) protein (290aa)
Chromosome partitioning protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC6_9GAMM
ParB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AGG90970.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2807_curated_3

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comp(1163..4201)
DNA (3039bp) protein (1013aa)
Type III restriction-modification enzyme, R/helicase subunit n=1 Tax=mine drainage metagenome RepID=T1BZ07_9ZZZZ
Type III restriction-modification enzyme, R/helicase subunit {ECO:0000313|EMBL:EQD78501.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2807_curated_4
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4198..6099)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7P9W0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS91504.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_2807_curated_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6096..9404)
DNA (3309bp) protein (1103aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPR5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34464.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_solids2_trim150_scaffold_2807_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9544..10260
DNA (717bp) protein (239aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH3_9GAMM
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL90864.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_2807_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10325..10693
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC54_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97045.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2807_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10754..11701)
DNA (948bp) protein (316aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC9_9GAMM
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AGG90967.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2807_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11897..13657
DNA (1761bp) protein (587aa)
Sodium (Na+) symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH6_9GAMM
Sodium (Na+) symporter {ECO:0000313|EMBL:EIL90867.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sodium (Na+) symporter
scnpilot_solids2_trim150_scaffold_2807_curated_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13753..14724)
DNA (972bp) protein (324aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WND0_9GAMM
putative transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2807_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14872..15669
DNA (798bp) protein (266aa)
Putative salt-induced outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH9_9GAMM
Putative salt-induced outer membrane protein {ECO:0000313|EMBL:EIL90870.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative salt-induced outer membrane protein
scnpilot_solids2_trim150_scaffold_2807_curated_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15927..16841)
DNA (915bp) protein (305aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUI0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2807_curated_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16983..17738
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAH4_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2807_curated_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17895..20948)
DNA (3054bp) protein (1018aa)
acriflavine resistance protein B n=1 Tax=Dyella ginsengisoli RepID=UPI0003474D2A
Acriflavine resistance protein B {ECO:0000313|EMBL:KGI79237.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
acriflavin resistance protein
scnpilot_solids2_trim150_scaffold_2807_curated_15
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20958..22118)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034687CD
RND family efflux transporter MFP subunit
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_2807_curated_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22244..23740)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035DB3DA
Uncharacterized protein {ECO:0000313|EMBL:KGI79235.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
NodT family RND efflux system outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_2807_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23835..24368)
DNA (534bp) protein (178aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMQ0_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG90918.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2807_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24376..25662)
DNA (1287bp) protein (429aa)
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ47_9GAMM
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGG90919.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2807_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25794..26381
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPP5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89186.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying 19 items

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