ggKbase home page

scnpilot_solids2_trim150_scaffold_2673_curated_1

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 3..158

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMM3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 51.0
  • Bit_score: 97
  • Evalue 3.00e-18
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EIM00715.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 51.0
  • Bit_score: 97
  • Evalue 4.30e-18
isopropylmalate/homocitrate/citramalate synthase similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 51.0
  • Bit_score: 95
  • Evalue 6.20e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 156
GTGGCCAGCGAGGACGTGGTCTACATGCTGCACGGCATGGGCATCGAGACCGGCATCGACCTCGACCTGCTGATCGCCACCGGCGCCTGGCTGGCCGCGCAACTGCACAAGGAAACCGCCAGCCGGGTCACCCGGGCACGCACCGCCGCGGCCTGA
PROTEIN sequence
Length: 52
VASEDVVYMLHGMGIETGIDLDLLIATGAWLAAQLHKETASRVTRARTAAA*