ggKbase home page

scnpilot_solids2_trim150_scaffold_2765_curated_13

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 8458..9582

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=666685 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 375.0
  • Bit_score: 714
  • Evalue 9.10e-203
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 375.0
  • Bit_score: 714
  • Evalue 6.50e-203
ribosomal protein S12 methylthiotransferase RimO similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 375.0
  • Bit_score: 714
  • Evalue 2.00e-203

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGCCCCAGCCCACCCAGAAGATCGGCTTCGTCAGTCTCGGTTGCCCCAAGGCGCTGGTGGATTCCGAGCGCATCCTCACCCAGCTCAAGGTGGAGGGCTACCAGATCGTGCCCAGCTACGGCGAGGCCGACGCGGTGGTGGTGAACACCTGCGGCTTCATCGACGCGGCGGTGCAGGAGTCGCTGGACTCGATCGGCACCGCGCTCAACGAGAACGGCAAGGTGATCGTCACCGGCTGCCTGGGCAAGCGCGCCGAGCTGATCCGCGAGGCCTATCCGGACGTGCTCTCGATCAGCGGCCCGCAGGATTACGCCAGCGTGATGAGCGCGGTGCACGAGGTGTTGCCGCCCACGCGCAACAAGTTCCTCGACATCGTGCCGGACACTGGCGTGAAGCTGACGCCGAAGCACTACGCGTACCTCAAGATTTCCGAGGGCTGCAACCACCGCTGCAGCTTCTGCATCATCCCCTCGATGCGCGGCAACCTGGTCTCGCGGCCGGTCGACGAGGTGCTGGTGGAGGCCGAGAAACTGGTCAGGGGCGGCGTGAAGGAACTGCTGGTGATCTCGCAGGACACCAGCGCCTATGGCGTCGACGTGAAGTACGCCGAGCGCCCGTGGCGCGGGAAGAACTACCGCACCCGCATGACCGAGCTGTGCGAAGGCCTGTCCGAACTCGGCGCGTGGACGCGCCTGCACTACGTCTACCCGTACCCGCACGTGGACGAGCTGATGCCGCTGATGGCGGGGGGGAAAATCCTGCCCTACCTCGACATCCCGTTCCAGCACGCCAGCCCGCGCATCCTGAAATTGATGAAGCGCCCCGGCAACATCGACAAGACGCTGGAGCGCATCCGGAACTGGCGCAAGCTGGTGCCGGAGCTGACCATCCGCAGCACCTTCATCGTCGGTTTCCCCGGCGAGACCGATGCCGAGTTCGAGGAGCTGCTGGACTTCCTGCGCGAGGCCGAACTCGATCGCGTGGGCGCGTTCGCCTATTCGCCGGTGGACGGCGCCAAGGCCAACGAGCTGCCCGACGCGGTGTCCGAGGAACTGAAGGAGGATCGCCTCGAACAGTTCATGGCGGTGCAGGCGGAAATCTCCGCCGCCAAACTGCAGCGCAAG
PROTEIN sequence
Length: 375
MPQPTQKIGFVSLGCPKALVDSERILTQLKVEGYQIVPSYGEADAVVVNTCGFIDAAVQESLDSIGTALNENGKVIVTGCLGKRAELIREAYPDVLSISGPQDYASVMSAVHEVLPPTRNKFLDIVPDTGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGNLVSRPVDEVLVEAEKLVRGGVKELLVISQDTSAYGVDVKYAERPWRGKNYRTRMTELCEGLSELGAWTRLHYVYPYPHVDELMPLMAGGKILPYLDIPFQHASPRILKLMKRPGNIDKTLERIRNWRKLVPELTIRSTFIVGFPGETDAEFEELLDFLREAELDRVGAFAYSPVDGAKANELPDAVSEELKEDRLEQFMAVQAEISAAKLQRK