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scnpilot_solids2_trim150_scaffold_2765_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2765_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..551
DNA (549bp) protein (183aa)
Chromosome partitioning ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB8_9GAMM
Chromosome partitioning ATPase {ECO:0000313|EMBL:EIM02010.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATPase involved in chromosome partitioning
scnpilot_solids2_trim150_scaffold_2765_curated_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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548..1090
DNA (543bp) protein (181aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H5_9GAMM
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EIL95766.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative flavoprotein
scnpilot_solids2_trim150_scaffold_2765_curated_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1268..1834
DNA (567bp) protein (189aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8H4_9GAMM
deoxycytidine triphosphate deaminase
scnpilot_solids2_trim150_scaffold_2765_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1929..2408
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88478.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2765_curated_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2475..3131)
DNA (657bp) protein (219aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345D43D
pyrrolidone-carboxylate peptidase
scnpilot_solids2_trim150_scaffold_2765_curated_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3146..4114)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F86680
Uncharacterized protein {ECO:0000313|EMBL:AHX15476.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2765_curated_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..4806)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E535CA
Membrane protein {ECO:0000313|EMBL:AHX15477.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2765_curated_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4803..5567)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8914
UPF0271 protein CH75_21295 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
LamB/YcsF family protein; K07160 UPF0271 protein
scnpilot_solids2_trim150_scaffold_2765_curated_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5578..6558)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034705D0
Uncharacterized protein {ECO:0000313|EMBL:AHX15479.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
atzFB; allophanate hydrolase subunit 2; K06350 antagonist of KipI
scnpilot_solids2_trim150_scaffold_2765_curated_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6555..7262)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036BC5FC
Allophanate hydrolase {ECO:0000313|EMBL:AHX15480.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
allophanate hydrolase subunit 1
scnpilot_solids2_trim150_scaffold_2765_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7264..7683)
DNA (420bp) protein (140aa)
Histidine triad (HIT) protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC1_9GAMM
Histidine triad (HIT) protein {ECO:0000313|EMBL:EIM02013.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
scnpilot_solids2_trim150_scaffold_2765_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7680..8348)
DNA (669bp) protein (223aa)
Carboxymethylenebutenolidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRC2_9GAMM
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EIM02014.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dienelactone hydrolase-like enzyme
scnpilot_solids2_trim150_scaffold_2765_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8458..9582
DNA (1125bp) protein (375aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=666685 species="Bacteria; Pro
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Rhodanobacter denitrificans RepID=I4WLD4_9GAMM
ribosomal protein S12 methylthiotransferase RimO
Displaying 13 items

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