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scnpilot_solids2_trim150_scaffold_6747_curated_13

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(8854..10692)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 612.0
  • Bit_score: 1180
  • Evalue 0.0
Phosphomethylpyrimidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 612.0
  • Bit_score: 1180
  • Evalue 0.0
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 616.0
  • Bit_score: 997
  • Evalue 1.50e-288

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1839
ATGAACCATCCCGCCGCTGCCACCGCACCCTCGACGGTTACCACCGGCCCGATCCGCGGCTCGCGCAAGGTCTACGTCAGCCCGCCCGGGCATCCGTCGCTGCGCGTGCCGATGCGCGAGATCGCGCTGAAGGACCCGGTGACGCCGGCGCTGCACGTCTACGATCCGTCCGGACCCTACACCGACGACGACGCACGGATCGATCTCGCCGCGGGCCTGCCGCCGGTGCGCGACGCGTGGATCGAGGCGCGCGGCTTTCCGGCCATCGAAGGACGCGCCGCCCGCCCGGAGGACAACGGCGGGGTCGGCGCGGAACGGCTGGTGGCGCCGTGTCCCGCGCAACGTACGCTGCGCATGGGCGAAGCCGGCCAGCCGGTGACCCAGCTGGAATTCGCCCGCGCCGGCATCATCACCGAGGAAATGATCTACGCCGCCCAGCGCGAGAACCTGGGGCGCGCGCAGATGCATGAAGATGCCGCCGCCCGGCTGGCCGATGGCGAGGCGTTCGGCGCAGCCCTGCCCGCCTTTGTCACGCCCGAATTCGTGCGCAGCGAAATCGCGTCGGGGCGCGCCATCATCCCGGCCAACATCAACCACGGCGAGCTGGAGCCGATGGTGATCGGGCGCAACTTCCTGGTGAAGGTCAACGCGAACATCGGCAATTCGGCGGTGTCTTCCGGCGTGGCCGAGGAGGTCGAGAAACTGGTGTGGGCGATCCGCTGGGGCGCGGACACCCTCATGGATCTGTCCACCGGCCGCAACATCCACAACATCCGCTCTTGGATCATCCGCAACTCGCCGGTGCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAAAAAGTCGGCGGCGATCCGGCGCGGCTGAGCTGGGAAGTCTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTGGACTATTTCACCATCCACGCCGGCGTGCGCCTGCACCACGTGCCGCTGACCGCACGGCGGGTCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCGCGCTGGTGCCTCAGCCACCACCGCGAGAGTTTCCTGTACGAGCACTTCGCCGAGATCTGCCAGATCATGCGCCGCTACGACGTCGCCTTCTCGCTGGGCGACGGCCTGCGCCCCGGCTCGATCGCCGACGCCAACGACGCGGCCCAGTTCGCCGAACTCGAAACCCTGGGCGAGCTGACGAAGATCGCGTGGGCGCACGGCTGCCAGGTGATGATCGAAGGGCCCGGCCATGTGCCGATGCACAAGATCAAGCTCAACATGGACAAGCAGTTGGAGCACTGCGCCGAGGCGCCGTTCTACACGCTGGGCCCGCTGACCACCGACATCGCACCGGGCTACGACCACATCACCTCGGGCATCGGCGCGGCGATGATCGGCTGGTTCGGCACCGCCATGCTCTGCTACGTCACGCCGAAGGAACATCTCGGCCTGCCGAATCGCGACGACGTCAAGACCGGCGTCATCACCTACAAGATCGCGGCGCACGCCGCCGACCTCGCCAAGGGCCACCCGGCCGCGCAGCGCCGCGACGACGCGCTGTCGCGCGCGCGCTTCGAATTCCGCTGGGAGGACCAGTTCAACCTGTCGCTCGATCCCGACACGGCGCGCGCCTACCACGACGCCACCCTGCCGAAGGAGGCGCACAAGACCGCGCATTTCTGCTCGATGTGCGGGCCGAAATTCTGCTCGATGCAGATCACCCAGGACCTGCGCCGCGAGGTGCGCGCGATGGAGGAGACCGCGCTGCGCGCCGGCATGGACGGCAAGTCGCGCGAGTTCGTCGAGCGCGGCGCCACGCTCTACGTGCCGACCGGGGAGTAG
PROTEIN sequence
Length: 613
MNHPAAATAPSTVTTGPIRGSRKVYVSPPGHPSLRVPMREIALKDPVTPALHVYDPSGPYTDDDARIDLAAGLPPVRDAWIEARGFPAIEGRAARPEDNGGVGAERLVAPCPAQRTLRMGEAGQPVTQLEFARAGIITEEMIYAAQRENLGRAQMHEDAAARLADGEAFGAALPAFVTPEFVRSEIASGRAIIPANINHGELEPMVIGRNFLVKVNANIGNSAVSSGVAEEVEKLVWAIRWGADTLMDLSTGRNIHNIRSWIIRNSPVPIGTVPIYQALEKVGGDPARLSWEVFRDTLIEQAEQGVDYFTIHAGVRLHHVPLTARRVTGIVSRGGSIMARWCLSHHRESFLYEHFAEICQIMRRYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWAHGCQVMIEGPGHVPMHKIKLNMDKQLEHCAEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNRDDVKTGVITYKIAAHAADLAKGHPAAQRRDDALSRARFEFRWEDQFNLSLDPDTARAYHDATLPKEAHKTAHFCSMCGPKFCSMQITQDLRREVRAMEETALRAGMDGKSREFVERGATLYVPTGE*