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scnpilot_solids2_trim150_scaffold_6747_curated_14

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 11131..11559

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ24_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 143.0
  • Bit_score: 271
  • Evalue 5.50e-70
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 143.0
  • Bit_score: 271
  • Evalue 7.70e-70
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 143.0
  • Bit_score: 252
  • Evalue 1.10e-64

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGTCCCAAGCCCTGGTGACCGCCAACTTCCCCTTGCCCAGCGTGGTTGGCAGCCTGGATGCCTACATTTCCGCAGTGCATCGCATCCCGGTGCTCAGCGTGGAAGAGGAACAGGCGCTGTCGCGCGATTATCTGCAGCAGGACAACCTGGACGCGGCCAAGAAGCTGGTGATGTCGCACCTGCGTTTCGTGGTGCACGTGGCGCGCGGCTACTCCGGCTACGGCCTGCAGCTTGCCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCAAGCGTTTCGACCCGGACATGGGCGTGCGCCTGGTCAGCTTCGCGGTGCACTGGATTCGCGCCGAGATGCACGAGTTCATCCTGAAGAACTGGCGCATCGTGAAGGTCGCCACCACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGC
PROTEIN sequence
Length: 143
MSQALVTANFPLPSVVGSLDAYISAVHRIPVLSVEEEQALSRDYLQQDNLDAAKKLVMSHLRFVVHVARGYSGYGLQLADLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLR