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scnpilot_solids2_trim150_scaffold_67_curated

Search features with annotation key words

Displaying items 1-30 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_67_curated_1
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(574..1410)
DNA (837bp) protein (279aa)
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
Lytic transglycosylase catalytic n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CDI0_SPHS2
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADZ77715.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_67_curated_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1563..3503
DNA (1941bp) protein (647aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VXE7_DYAFD
peptidase M1 membrane alanine aminopeptidase
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:ACT93290.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_67_curated_3
unknown

Not on your lists

comp(3446..3610)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_67_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3651..4298
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F1366
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:AHF16553.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
lysozyme
scnpilot_solids2_trim150_scaffold_67_curated_5
unknown

Not on your lists

4333..4551
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_67_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4548..4973)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB92_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02475.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_67_curated_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5110..5838
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AEF99
Putative cytochrome c oxidase accessory protein {ECO:0000313|EMBL:GAO42238.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
electron transport protein SCO1/SenC; K07152
scnpilot_solids2_trim150_scaffold_67_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5849..6268
DNA (420bp) protein (140aa)
Ferric uptake regulator, Fur family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI8_NIAKG
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEW02528.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_67_curated_9

Not on your lists

6332..6946
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037087A7
Uncharacterized protein {ECO:0000313|EMBL:AIA19131.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_67_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7255..7911
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUY0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15797.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_67_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7939..8520)
DNA (582bp) protein (194aa)
Putative lipoprotein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNN6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17493.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_67_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8736..9854
DNA (1119bp) protein (373aa)
radical SAM protein n=1 Tax=Segetibacter koreensis RepID=UPI000363E614
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACU58294.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_67_curated_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9886..10959
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000367F714
Uncharacterized protein {ECO:0000313|EMBL:KIC93798.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_67_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11007..11456
DNA (450bp) protein (150aa)
Regulatory protein MarR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB85_NIAKG
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEW02468.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_67_curated_15
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11471..12667
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB84_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42808.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_67_curated_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12890..14362
DNA (1473bp) protein (491aa)
RNA polymerase, sigma 54 subunit, RpoN n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK09_CHIPD
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_67_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14370..15038
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB79_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02462.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_67_curated_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15343..16572)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E168
major facilitator superfamily permease; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_67_curated_19
unknown

Not on your lists

comp(16600..17016)
DNA (417bp) protein (139aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_67_curated_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17047..19371
DNA (2325bp) protein (775aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
ATP-dependent DNA helicase n=1 Tax=Segetibacter koreensis RepID=UPI0003613B6A
scnpilot_solids2_trim150_scaffold_67_curated_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19451..20776)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0Q8_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:KIC89921.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_67_curated_22
unknown

Not on your lists

20808..20996
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_67_curated_23
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20996..21253
DNA (258bp) protein (86aa)
Cytotoxic translational repressor of toxin-antitoxin stability system n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LCG9_9CYAN
plasmid stabilization system
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_67_curated_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21250..23511)
DNA (2262bp) protein (754aa)
xenobiotic-transporting ATPase (EC:3.6.3.44); K06147 ATP-binding cassette, subfamily B, bacterial
Xenobiotic-transporting ATPase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELI0_RUNSL
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC89922.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_67_curated_25
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23706..25103)
DNA (1398bp) protein (466aa)
Thioredoxin family protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J2Q7_9FLAO
Thioredoxin family protein {ECO:0000313|EMBL:EAZ96628.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
thiol:disulfide oxidoreductase TlpA
scnpilot_solids2_trim150_scaffold_67_curated_26
unknown

Not on your lists

comp(25175..25405)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_67_curated_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(25529..27133)
DNA (1605bp) protein (535aa)
Vitamin K epoxide reductase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F123_EMTOG
Vitamin K epoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_67_curated_28
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27262..27519
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003673EF6
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEI50724.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_67_curated_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27750..28349
DNA (600bp) protein (200aa)
thioredoxin n=1 Tax=Segetibacter koreensis RepID=UPI0003660D82
Scaffold protein Nfu/NifU
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_67_curated_30
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

28598..29545
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase n=1 Tax=Rudanella lutea RepID=UPI00035E544B
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying items 1-30 of 188 in total

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