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scnpilot_solids2_trim150_scaffold_662_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_662_curated_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..1463)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034D7D98
Uncharacterized protein {ECO:0000313|EMBL:AHM63624.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
PKD domain-containing protein
scnpilot_solids2_trim150_scaffold_662_curated_2
unknown

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comp(1706..1897)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_662_curated_3
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2171..3085
DNA (915bp) protein (305aa)
dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol, alpha-3-L-rhamnosyltransferase {ECO:0000313|EMBL:EMR03044.1}; EC=2.4.-.- {ECO:0000313|EMBL:EMR03044.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol, alpha-3-L-rhamnosyltransferase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NX74_9BACT
family 2 glycosyl transferase; K07011
scnpilot_solids2_trim150_scaffold_662_curated_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3097..4476)
DNA (1380bp) protein (460aa)
cytoplasmic peptidoglycan synthetase domain-containing protein; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
Cytoplasmic peptidoglycan synthetase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7R7_PALPW
UDP-N-acetylmuramate--alanine ligase {ECO:0000313|EMBL:KIC93736.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_662_curated_5
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4626..5834
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003787156
Glutamate:protein symporter {ECO:0000313|EMBL:KGO93254.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
sodium:dicarboxylate symporter; K11103 aerobic C4-dicarboxylate transport protein
scnpilot_solids2_trim150_scaffold_662_curated_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5951..6604
DNA (654bp) protein (218aa)
MORN variant repeat protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI93_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43516.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
MORN variant repeat protein
scnpilot_solids2_trim150_scaffold_662_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6647..7063
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361F330
Uncharacterized protein {ECO:0000313|EMBL:KIC93100.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_662_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7171..7719
DNA (549bp) protein (183aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365EE76
scnpilot_solids2_trim150_scaffold_662_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7874..8410
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00235.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_662_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8429..8782
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00236.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_662_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8909..11320)
DNA (2412bp) protein (804aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCU2_NIAKG
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEW03546.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_662_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11435..12769
DNA (1335bp) protein (445aa)
glycerate kinase; K00050 hydroxypyruvate reductase [EC:1.1.1.81]
Glycerate kinase {ECO:0000313|EMBL:AEW03547.1}; EC=2.7.1.31 {ECO:0000313|EMBL:AEW03547.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glycerate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCU3_NIAKG
scnpilot_solids2_trim150_scaffold_662_curated_13
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12810..14171
DNA (1362bp) protein (454aa)
Oxidoreductase, FAD-binding, putative n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHM2_9DELT
Oxidoreductase, FAD-binding, putative {ECO:0000313|EMBL:EDM74646.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
FAD linked oxidase domain-containing protein
scnpilot_solids2_trim150_scaffold_662_curated_14
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14183..14815)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KP63_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05700.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_662_curated_15
unknown

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comp(15008..15241)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_662_curated_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15538..15759)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41299.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_662_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15990..16643
DNA (654bp) protein (218aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F5CE3
Fe(3+)-transporting ATPase
scnpilot_solids2_trim150_scaffold_662_curated_18
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16944..17903
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JKI7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69295.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
scnpilot_solids2_trim150_scaffold_662_curated_19
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17972..19681)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FZT0_SHESH
Uncharacterized protein {ECO:0000313|EMBL:KFE97346.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_662_curated_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19773..20738)
DNA (966bp) protein (322aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLI7_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC96278.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase C14 caspase catalytic subunit p20
scnpilot_solids2_trim150_scaffold_662_curated_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20919..21992)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG47_SPILD
Uncharacterized protein {ECO:0000313|EMBL:KIC96260.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_662_curated_22
unknown

Not on your lists

22113..22427
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_662_curated_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22298..22705)
DNA (408bp) protein (136aa)
Histidine triad (HIT) protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRA7_9SPHI
HIT family hydrolase {ECO:0000313|EMBL:AHF15984.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation
scnpilot_solids2_trim150_scaffold_662_curated_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22801..23352)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371E4D9
Uncharacterized protein {ECO:0000313|EMBL:GAO42556.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
peroxidase-like protein
scnpilot_solids2_trim150_scaffold_662_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23358..24431)
DNA (1074bp) protein (358aa)
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Methionine synthase vitamin-B12 independent n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD35_NIAKG
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:AEV98267.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_662_curated_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24493..25041)
DNA (549bp) protein (183aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371A886
peroxidase-like protein
scnpilot_solids2_trim150_scaffold_662_curated_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25060..26304)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B04E0
Uncharacterized protein {ECO:0000313|EMBL:KIC96166.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_662_curated_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26308..29055)
DNA (2748bp) protein (916aa)
TonB-dependent receptor n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRF1_HALH1
TonB-dependent receptor {ECO:0000313|EMBL:KIC96006.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-dependent receptor
Displaying 28 items

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