ggKbase home page

scnpilot_solids2_trim150_scaffold_2172_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2172_curated_1
unknown

Not on your lists

comp(1..204)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2172_curated_2
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(280..1467)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=3 Tax=Bacillus cereus group RepID=C3ED84_BACTU
L-fucosamine transferase {ECO:0000313|EMBL:AHA75393.1}; TaxID=529122 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis YBT-1518.;"
wbuB; L-fucosamine transferase
scnpilot_solids2_trim150_scaffold_2172_curated_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1469..2686)
DNA (1218bp) protein (406aa)
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ACU62185.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ACU62185.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLX1_CHIPD
scnpilot_solids2_trim150_scaffold_2172_curated_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2637..3755)
DNA (1119bp) protein (373aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLX2_CHIPD
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACU62186.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_2172_curated_5
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3899..4918)
DNA (1020bp) protein (340aa)
FnlA id=3692289 bin=GWF2_Bacteroidetes_33_16 species=Escherichia coli genus=Escherichia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
wbjB; FnlA
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_solids2_trim150_scaffold_2172_curated_6
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4936..5607)
DNA (672bp) protein (224aa)
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:EPR69959.1}; EC=2.3.1.28 {ECO:0000313|EMBL:EPR69959.1};; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
chloramphenicol acetyltransferase (fragment) (EC:2.3.1.28)
Chloramphenicol acetyltransferase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WT77_9BACT
scnpilot_solids2_trim150_scaffold_2172_curated_7
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5660..6799)
DNA (1140bp) protein (380aa)
Glycosyl transferase group 1 n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EKU9_CORAD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADE55006.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
scnpilot_solids2_trim150_scaffold_2172_curated_8
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6884..8002)
DNA (1119bp) protein (373aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EPR68423.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EPR68423.1};; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WWN7_9BACT
scnpilot_solids2_trim150_scaffold_2172_curated_9
unknown

Not on your lists

8034..8174
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2172_curated_10
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8118..9317)
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter sp. NBRC 100985 RepID=G7G960_9GAMM
hypothetical protein
O-antigen polymerase {ECO:0000313|EMBL:EFK33064.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
scnpilot_solids2_trim150_scaffold_2172_curated_11
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9365..10756)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000378C81D
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CRE92727.1}; TaxID=630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica.;"
polysaccharide biosynthesis protein
Displaying 11 items

View Taxonomy