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scnpilot_solids2_trim150_scaffold_762_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_762_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..1621
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNK4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99921.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_762_curated_2
unknown

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1587..2186
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_762_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2755..5709
DNA (2955bp) protein (985aa)
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL27_NIAKG
scnpilot_solids2_trim150_scaffold_762_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5696..6844
DNA (1149bp) protein (383aa)
DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase IV n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL26_NIAKG
scnpilot_solids2_trim150_scaffold_762_curated_5
unknown

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6880..7254
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_762_curated_6
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7274..8068
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W078_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK36039.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_762_curated_7
unknown

Not on your lists

comp(8096..8512)
DNA (417bp) protein (139aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_762_curated_8
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8577..8834)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AA7AF
Uncharacterized protein {ECO:0000313|EMBL:KIA92258.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
scnpilot_solids2_trim150_scaffold_762_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9011..9382)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A2FB5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00168.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_762_curated_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9521..9847
DNA (327bp) protein (109aa)
Single-stranded DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8J7_NIAKG
ssDNA-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_762_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9876..10310
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8J8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00170.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_762_curated_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10878..11252
DNA (375bp) protein (125aa)
Single-stranded DNA-binding protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTC4_LEAB4
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
scnpilot_solids2_trim150_scaffold_762_curated_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11298..12344
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003790A84
Alpha/beta hydrolase {ECO:0000313|EMBL:KIC89887.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phage/plasmid-like protein
scnpilot_solids2_trim150_scaffold_762_curated_14
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12498..14333
DNA (1836bp) protein (612aa)
ParB-like partition protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT4_9SPHI
ParB-like partition protein {ECO:0000313|EMBL:EHQ24274.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
partitioning protein; K03497 chromosome partitioning protein, ParB family
scnpilot_solids2_trim150_scaffold_762_curated_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14920..15390
DNA (471bp) protein (157aa)
DNA repair protein RadC n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWX7_9SPHI
DNA repair protein {ECO:0000313|EMBL:KIC89896.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA repair protein
scnpilot_solids2_trim150_scaffold_762_curated_16
unknown

Not on your lists

comp(15462..15833)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_762_curated_17
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15893..16174)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003735665
Uncharacterized protein {ECO:0000313|EMBL:KGO80783.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_762_curated_18
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16334..17239
DNA (906bp) protein (302aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase
DNA primase {ECO:0000313|EMBL:ADF53740.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids2_trim150_scaffold_762_curated_19
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17471..17872
DNA (402bp) protein (134aa)
Mobilization protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBX2_9SPHI
Mobilization protein {ECO:0000313|EMBL:EHQ27050.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_762_curated_20
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17847..19112
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A6A41
relaxase/mobilization nuclease
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids2_trim150_scaffold_762_curated_21
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19158..21140
DNA (1983bp) protein (661aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO80778.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
type IV secretory pathway VirD4 components-like protein
scnpilot_solids2_trim150_scaffold_762_curated_22
unknown

Not on your lists

comp(21316..22431)
DNA (1116bp) protein (372aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_762_curated_23
Acinetobacter oleivorans, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22684..23688)
DNA (1005bp) protein (335aa)
membrane protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248ED03
hypothetical protein
Hypothetical membrane-associated protein {ECO:0000313|EMBL:ADI89916.1}; TaxID=436717 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter oleivorans (strain JCM 16667 / KCTC 23045 / DR1).;"
scnpilot_solids2_trim150_scaffold_762_curated_24
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23770..24726)
DNA (957bp) protein (319aa)
Putative uncharacterized protein id=4162987 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_762_curated_25
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24830..26095
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037471F1
Uncharacterized protein {ECO:0000313|EMBL:KIA92274.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
Displaying 25 items

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