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scnpilot_solids2_trim150_scaffold_505_curated

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_505_curated_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(573..878)
DNA (306bp) protein (102aa)
Sigma-54 modulation protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E8_NIAKG
30S ribosomal protein S30 {ECO:0000313|EMBL:KIC90344.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein
scnpilot_solids2_trim150_scaffold_505_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1046..1954)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364BF1F
Tyrosine recombinase xerC; K03733 integrase/recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2330..2929
DNA (600bp) protein (200aa)
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase alpha chain {ECO:0000313|EMBL:AEW01187.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AEW01187.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
riboflavin synthase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00037F1178
scnpilot_solids2_trim150_scaffold_505_curated_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2961..4580)
DNA (1620bp) protein (540aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y543_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28586.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids2_trim150_scaffold_505_curated_5
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4640..5944
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003702EE3
Uncharacterized protein {ECO:0000313|EMBL:AHJ99281.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
scnpilot_solids2_trim150_scaffold_505_curated_6
unknown

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5993..6295
DNA (303bp) protein (101aa)
acyltransferase
scnpilot_solids2_trim150_scaffold_505_curated_7

Not on your lists

6276..7094
DNA (819bp) protein (273aa)
Putative acyltransferase 3 n=1 Tax=uncultured bacterium RepID=L7RXP1_9BACT
Putative acyltransferase 3 {ECO:0000313|EMBL:AGC09659.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acyltransferase 3
scnpilot_solids2_trim150_scaffold_505_curated_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7101..8801
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV88_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC90348.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_9
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8827..9540
DNA (714bp) protein (238aa)
Glycosyl transferase {ECO:0000313|EMBL:AKC18007.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Glycosyl transferase, group 2 family protein id=2836338 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_505_curated_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9537..10274
DNA (738bp) protein (246aa)
Putative methyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SIG0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC90349.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
type 12 methyltransferase
scnpilot_solids2_trim150_scaffold_505_curated_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10282..11985
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SUH6_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:KIC90350.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12000..17045)
DNA (5046bp) protein (1682aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7F7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90352.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17049..18176)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037CEB2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01194.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18373..19650
DNA (1278bp) protein (426aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Tyrosine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7F9_NIAKG
scnpilot_solids2_trim150_scaffold_505_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19865..20209)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01733.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20380..21525)
DNA (1146bp) protein (382aa)
Putative membrane protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THB9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90462.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21530..25861)
DNA (4332bp) protein (1444aa)
PKD domain containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THB8_NIAKG
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEW01728.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26063..26497)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THB7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41306.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26507..28006)
DNA (1500bp) protein (500aa)
carboxypeptidase Taq; K01299 carboxypeptidase Taq [EC:3.4.17.19]
Carboxypeptidase Taq {ECO:0000313|EMBL:AEW01726.1}; EC=3.4.17.19 {ECO:0000313|EMBL:AEW01726.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Carboxypeptidase Taq n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THB6_NIAKG
scnpilot_solids2_trim150_scaffold_505_curated_20
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28207..29019)
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:AKD02825.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Uncharacterized protein id=3341360 bin=GWC2_Bacteroidetes_40_13 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29096..30193
DNA (1098bp) protein (366aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA9_NIAKG
NGG1p interacting factor 3 protein, NIF3
scnpilot_solids2_trim150_scaffold_505_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30215..30970
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003783BB0
hypothetical protein; K07164
Uncharacterized protein {ECO:0000313|EMBL:AEW01718.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_23
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31115..32665)
DNA (1551bp) protein (517aa)
Putative orphan protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDQ8_9SPHI
Putative orphan protein {ECO:0000313|EMBL:EDM36396.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33044..33352
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLK7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96576.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33425..34618)
DNA (1194bp) protein (398aa)
aspartate transaminase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate transaminase {ECO:0000313|EMBL:AEV96685.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEV96685.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate transaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP79_NIAKG
scnpilot_solids2_trim150_scaffold_505_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34751..35626
DNA (876bp) protein (292aa)
bifunctional protein folD; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLJ9_NIAKG
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

35713..36366
DNA (654bp) protein (218aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR94_CHIPD
radical SAM protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_505_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36659..37651)
DNA (993bp) protein (331aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKZ3_NIAKG
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEW00832.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_505_curated_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37760..38302)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMK7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC91898.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_505_curated_30
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38381..39214
DNA (834bp) protein (278aa)
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373BC89
Dihydropteroate synthase {ECO:0000313|EMBL:ETK10607.1}; TaxID=1411021 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 6/7/9.;"
Displaying items 1-30 of 50 in total

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