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scnpilot_solids2_trim150_scaffold_610_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_610_curated_1
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

295..711
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1MHV3_9FLAO
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_610_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

813..2324
DNA (1512bp) protein (504aa)
sulfatase n=1 Tax=Segetibacter koreensis RepID=UPI00037C4F4E
Sulfatase {ECO:0000313|EMBL:KIC95135.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_610_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2376..3791
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000362F0F4
Uncharacterized protein {ECO:0000313|EMBL:AHF16229.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_610_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3809..4516)
DNA (708bp) protein (236aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKW0_NIAKG
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEV99789.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_610_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4788..5393
DNA (606bp) protein (202aa)
Ribosomal protein L11 methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKV9_NIAKG
Methyltransferase {ECO:0000313|EMBL:KIC94682.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
50S ribosomal protein L11 methyltransferase
scnpilot_solids2_trim150_scaffold_610_curated_6
unknown

Not on your lists

5425..5697
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_610_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5738..7396
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003630904
Sulfate permease {ECO:0000313|EMBL:KIC94620.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SulP family sulfate permease; K03321 sulfate permease, SulP family
scnpilot_solids2_trim150_scaffold_610_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7506..8180)
DNA (675bp) protein (225aa)
Peptide methionine sulfoxide reductase msrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93717.1}; Flags: Fragment;; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_610_curated_9
unknown

Not on your lists

comp(8340..8567)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_610_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8618..10744
DNA (2127bp) protein (709aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA mismatch repair protein MutS domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGJ0_NIAKG
DNA mismatch repair protein MutS domain-containing protein; K07456 DNA mismatch repair protein MutS2
scnpilot_solids2_trim150_scaffold_610_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11021..13381
DNA (2361bp) protein (787aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCG7_NIAKG
integral membrane sensor hybrid histidine kinase
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:AEW02507.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_610_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13558..14568)
DNA (1011bp) protein (337aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-]
Glycosyl transferase family 9 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TED2_NIAKG
Glycosyl transferase family 9 {ECO:0000313|EMBL:AEV98342.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_610_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14683..15252)
DNA (570bp) protein (190aa)
Translation factor SUA5 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TED1_NIAKG
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Translation factor SUA5 {ECO:0000313|EMBL:AEV98341.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_610_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15315..16130
DNA (816bp) protein (272aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:AEV98338.1}; EC=2.3.1.117 {ECO:0000313|EMBL:AEV98338.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEC8_NIAKG
scnpilot_solids2_trim150_scaffold_610_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16135..17181
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEC7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98337.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_610_curated_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17474..18583
DNA (1110bp) protein (370aa)
Phage integrase family protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TRB7_9FLAO
integrase, tyrosine type site-specific recombinase
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_610_curated_17
unknown

Not on your lists

comp(18631..18870)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F0D7E
scnpilot_solids2_trim150_scaffold_610_curated_18
unknown

Not on your lists

comp(18954..19262)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C8BB6
scnpilot_solids2_trim150_scaffold_610_curated_19
unknown

Not on your lists

comp(19401..19583)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_610_curated_20
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19926..21032)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00030C296F
Uncharacterized protein {ECO:0000313|EMBL:KIA82450.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_610_curated_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21039..21806)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000371F031
Uncharacterized protein {ECO:0000313|EMBL:KIC89817.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Bacteroides conjugative transposon TraN protein
scnpilot_solids2_trim150_scaffold_610_curated_22
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21836..23134)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT3_ZUNPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53781.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids2_trim150_scaffold_610_curated_23
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23158..23670)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000371542F
Uncharacterized protein {ECO:0000313|EMBL:KFF13742.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
scnpilot_solids2_trim150_scaffold_610_curated_24
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23674..24291)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003825A16
Conjugal transfer protein {ECO:0000313|EMBL:KFF13743.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_610_curated_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24298..25494)
DNA (1197bp) protein (399aa)
TraJ family protein conjugative transposon n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJT0_ZUNPS
Conjugal transfer protein TraJ {ECO:0000313|EMBL:KIC89821.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TraJ family protein conjugative transposon
scnpilot_solids2_trim150_scaffold_610_curated_26
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25513..26142)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJS9_ZUNPS
Uncharacterized protein {ECO:0000313|EMBL:KGO80810.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_610_curated_27
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26170..26793)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372E41D
Uncharacterized protein {ECO:0000313|EMBL:KFF13746.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_610_curated_28
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26805..27476)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037148FF
Conjugal transfer protein TraI {ECO:0000313|EMBL:KGO85884.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_610_curated_29
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27640..27921)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZIB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY50993.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
scnpilot_solids2_trim150_scaffold_610_curated_30
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28097..30562)
DNA (2466bp) protein (822aa)
Bacteroides conjugative transposon TraG-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE11_FLAJ1
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIA95596.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
Type IV secretory pathway VirB4 components-like protein
Displaying items 1-30 of 31 in total

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