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scnpilot_solids2_trim150_scaffold_1508_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1508_curated_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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240..1490
DNA (1251bp) protein (417aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
FAD dependent oxidoreductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAN4_CHIPD
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KIC93679.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_1508_curated_2
unknown

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1815..2264
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1508_curated_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2514..3530
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374F9D4
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACT92521.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_1508_curated_4
unknown

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comp(3776..3952)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1508_curated_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4659..5105
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWM6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96776.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_1508_curated_6
unknown

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5116..5214
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1508_curated_7
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5354..5593
DNA (240bp) protein (80aa)
Metal dependent phosphohydrolase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3I5_FLAB3
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACU08998.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_1508_curated_8
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5755..6741
DNA (987bp) protein (329aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
Molybdenum cofactor biosynthesis protein A n=2 Tax=Elizabethkingia anophelis RepID=H0KTW5_9FLAO
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
scnpilot_solids2_trim150_scaffold_1508_curated_9
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6831..7454
DNA (624bp) protein (208aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1246994 species="Bacteri
Probable molybdenum cofactor guanylyltransferase n=2 Tax=Elizabethkingia anophelis RepID=H0KTW8_9FLAO
molybdopterin-guanine dinucleotide biosynthesis protein MobA
scnpilot_solids2_trim150_scaffold_1508_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7728..10100)
DNA (2373bp) protein (791aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NV77_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16321.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
oxidoreductase alpha (molybdopterin) subunit
scnpilot_solids2_trim150_scaffold_1508_curated_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10195..11058)
DNA (864bp) protein (288aa)
Protein fdhD n=1 Tax=Niabella soli DSM 19437 RepID=H1NV78_9SPHI
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein
scnpilot_solids2_trim150_scaffold_1508_curated_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11369..12559
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003612D7A
Uncharacterized protein {ECO:0000313|EMBL:KIC92911.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
integrase
scnpilot_solids2_trim150_scaffold_1508_curated_13
unknown

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12704..12862
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1508_curated_14
unknown

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comp(13342..13500)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1508_curated_15
RLO_RIF02_62_27, RIF2, Bacteria

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14119..14781
DNA (663bp) protein (221aa)
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
scnpilot_solids2_trim150_scaffold_1508_curated_16
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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15064..15681
DNA (618bp) protein (206aa)
Methyltransferase type 12 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFM5_FLUTR
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:AEA45739.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying 16 items

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