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scnpilot_solids2_trim150_scaffold_106_curated

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_106_curated_1
unknown

Not on your lists

89..364
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_106_curated_2
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(357..1319)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000372D1CB
php; putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:CCH00386.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_solids2_trim150_scaffold_106_curated_3
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1436..2809)
DNA (1374bp) protein (458aa)
FAD dependent oxidoreductase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8D2_9BACT
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCH00385.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_solids2_trim150_scaffold_106_curated_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2978..3706
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7Y5_NIAKG
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC93997.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_106_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3793..7302)
DNA (3510bp) protein (1170aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380F9D2
RNA-binding protein {ECO:0000313|EMBL:KIC94001.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ASPIC/UnbV domain-containing protein
scnpilot_solids2_trim150_scaffold_106_curated_6
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7925..11080
DNA (3156bp) protein (1052aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EID8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM34664.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
TonB-linked outer membrane protein, SusC/RagA family
scnpilot_solids2_trim150_scaffold_106_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11091..12929
DNA (1839bp) protein (613aa)
Putative outer membrane protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EID7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC94002.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RagB/SusD domain-containing protein
scnpilot_solids2_trim150_scaffold_106_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13096..16281
DNA (3186bp) protein (1062aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITB4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KIC94199.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_106_curated_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16286..17575
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4APM1_MARSH
Uncharacterized protein {ECO:0000313|EMBL:KIC94198.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_106_curated_10
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17854..18729)
DNA (876bp) protein (292aa)
Fructokinase {ECO:0000313|EMBL:KHJ38358.1}; EC=2.7.1.4 {ECO:0000313|EMBL:KHJ38358.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369E95D
transcriptional regulator/sugar kinase
scnpilot_solids2_trim150_scaffold_106_curated_11
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18747..21470)
DNA (2724bp) protein (908aa)
Putative alpha-1,2-mannosidase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NR34_9BACT
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EMR00969.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
alpha-1,2-mannosidase
scnpilot_solids2_trim150_scaffold_106_curated_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21532..22737)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7MX13_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC92913.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_106_curated_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22881..24233)
DNA (1353bp) protein (451aa)
Sugar transporter n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1K3_PEDHD
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ACU02979.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_106_curated_14
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24237..26015)
DNA (1779bp) protein (593aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1K2_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02978.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_106_curated_15
unknown

Not on your lists

26035..26148
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_106_curated_16
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26467..28812
DNA (2346bp) protein (782aa)
Alpha-1,2-mannosidase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KBV7_9BACT
Alpha-1,2-mannosidase {ECO:0000313|EMBL:CCH01610.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
alpha-1,2-mannosidase
scnpilot_solids2_trim150_scaffold_106_curated_17
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28886..30361)
DNA (1476bp) protein (492aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
catalase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4EC3C
scnpilot_solids2_trim150_scaffold_106_curated_18
unknown

Not on your lists

comp(30658..30990)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_106_curated_19
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31843..32031
DNA (189bp) protein (63aa)
Response regulator receiver n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXC9_PEDHD
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ETZ19393.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids2_trim150_scaffold_106_curated_20
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32055..32642)
DNA (588bp) protein (196aa)
two-component system, chemotaxis family, response regulator CheB (EC:3.1.1.61)
Two-component system, chemotaxis family, response regulator CheB {ECO:0000313|EMBL:CCG99986.1}; EC=3.1.1.61 {ECO:0000313|EMBL:CCG99986.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003816544
scnpilot_solids2_trim150_scaffold_106_curated_21
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32843..33436)
DNA (594bp) protein (198aa)
CheR-type MCP methyltransferase; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
CheR methyltransferase, SAM binding domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVC5_9SPHI
Chemotaxis protein CheR {ECO:0000313|EMBL:KGO91681.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
scnpilot_solids2_trim150_scaffold_106_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33433..34683)
DNA (1251bp) protein (417aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Multi-sensor hybrid histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8A9_NIAKG
multi-sensor hybrid histidine kinase
scnpilot_solids2_trim150_scaffold_106_curated_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34698..35645)
DNA (948bp) protein (316aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
GAF sensor hybrid histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAM9_CHIPD
GAF sensor hybrid histidine kinase
scnpilot_solids2_trim150_scaffold_106_curated_24
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35675..37222)
DNA (1548bp) protein (516aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GX24_9SPHI
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:EOR96060.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
multi-sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_106_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37369..37815)
DNA (447bp) protein (149aa)
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDP1_NIAKG
nuclear protein SET; K07117
Nuclear protein SET {ECO:0000313|EMBL:AEW01491.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_106_curated_26
unknown

Not on your lists

comp(37946..38395)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_106_curated_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38921..39787)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T824_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91334.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_106_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39871..40647
DNA (777bp) protein (259aa)
MazG family protein; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
MazG family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T911_NIAKG
MazG family protein {ECO:0000313|EMBL:AEV96964.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_106_curated_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40644..44408
DNA (3765bp) protein (1255aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000375CF62
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO43155.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
integral membrane sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_106_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44540..46213)
DNA (1674bp) protein (558aa)
PHP domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T913_NIAKG
PHP domain-containing protein; K02347 DNA polymerase (family X)
PHP domain protein {ECO:0000313|EMBL:AEV96966.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 94 in total

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